Id Trinity | FTRINITY_DN54436_c1_g2_i8 |
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Name Transcript | Ll_transcript_238773 |
Sequence | GGAAAAAATGTTCACCAGTAAAGTTAATACACATGTGAACCTTTCCTGCTCAAACAAGATTATGAAAGAAGAAAAACTTGATTGAAGTGATTAATATATA TAAGGATTTGGTGTGGCATTAGCAAAGATATTAATTTGATTGGCGCTGAGTCTCTGTTTCCATAATCATCTTTCCTTTTTCTTCTCTCTATGATGGCTTG GTTTCAGCAACAACTCAGTTCAGTTGACTGGGAACAAGAATCTTACCCCACCTTTCATGATTTCTCCGTTGTACCCTTCTTCGCTCTCTTCTTCCCCACC ATTCGTTTTATCCTTGACACCTTCCTTTTCGAGGTCCTTACTCCTTTTCTCACTTCATTTTTATCTTCCTCTTCTTTTTTCATCATTTTCCACTTCAAGA TTTGATCATACCCTTCAAACTTTGCATCCAAGATAAGTGTGTATGCACTTAACTAGGATTGTAAGAACAACAAAAGTTAAGATTTTGACTAATTTTTTGA AGGGCTGGTTCTAGAAAATTGTGAAGTTAAGTGTGTGTTTTGTAACACCAACTATGAGATTATAAGTTAATCTACTCAAGTAGCTGACTTGAAAAAAAAT AAGTTACTTGTTGCTGTGTTGGAGGGACTTTTTAAAATAAGCTACAAGTTTATAACTTTATATGCTTGTATTTGATTGATAAACTATTTGAGTTAGCTTA TGAATTATGAGCTTATAAGTTAGGAGGTTATTTCAGTTTACATCTATCAACTACTTTATCAGCTAATTTTATCCAACAATTTCACTTTAATTAGCTAGGT TATTAGCTCTTAACTTCGAGCTCCTAGTTTATAAGATTCCCTAGCTTATAAGCTTTCATCTATCTTGATTGGCCTTCAACTAGCTATAAATAATCAGCTA GTTGTTCCAAATAAAGCATAACTCGCAAGCGATAACGATGACCCCAGGATTTGAACCTTGGTTGTTAAGTAAAGCCCTTATGGAGTGGTGCACACTTGAA TTTTGAACCCATGACTTTAAAGTGGGCAGAAGATTGATTTTTGGAAATGGGCATGATATGCTGGATTTTCAGACAGATGAAAACAGAAAGAAGATTAGGA AGTTCAAGGAATCGGCATGGAAATGTGTTTATTTTCTATCAGCAGAATTTTTTGCTCTGTCTGTAACTTATGATGAGCCTTGGTTTACTAATACAAGATA TTTTTGGGTGGGTCCAGGAAGCCAGACCTGGCCAGATCAAAAGATTAAGTTGAAATTGAAGGGGCTTTATATGTATGCAGCTGGATTTTATTCGTACTCC ATACTCGCATTGATATTTTGGGAGACAAGGCGCTCTGACTTTGTGGTATCCATGTGCCATCATGTTGCTTCCATCATTCTCATAGTGTTATCTTACATTT TTAGGTTTGTTCGTGTTGGATCAATTGTTTTAGCTCTTCATGATGCTACTGATGTGTTTCTGGAGACAGGGAAAATGTCCATATACAGTGGTGCTGAAAA AATTGCTAGCATTGCATTTATTGGTTTTGTTTTATCTTGGACCATACTGCGCCTCATTTACTACCCATTCTGGGTTCTTCGGAGTACAAGGTTTGTGTTA GCTCAACTCCTAGTTTACATTTTTTCCTTCTATTGTCAGTTAGGGTTCCAGACCCGTTTAGAGTGTAGCTGCAAGTCTAGGTAATAGTCACTTCCTCTCT GTAATAAGTATCATCGAGTTTACCTTTGGTCTTTGGTTTTTCTTTTTTTCACATCAAACATCAAACTTTTCTGCACAAGTACATTCTAATGACTCTGCTT ACAATCCTGTTTTTATATCTCTATATCAATTGTCTCTCTAGTGTGTTCCAGTATGATATTTGAATGGATATGATGTCAGGATTTTTACCGAGACTTATTG TCCTATTAAACTGGTTTGATTTATTGTTCTCATGATTGTTCTTTTAATATAACACACATTCTATTAAGACTTGAGCACACGGTGAGAGCTCAATTCAAAA GACTAGTCTTAAGTCCTAACATGCATTCTCTTAAGCAGAATTCTTGAGCCAAGTTTTTGTAGATTATCAACAATTCTTATTCTGACAAAAATGTTATTTC ATTCTTACCTGATTCATACTATCAATAACATTACCAATGACATTTTCTACAAGACATCTTCATTTCTAAACTTTAACCATCAAAGCTATGTCAGTGATAT CAAAGTCCAATTATTAATTTCTCAAGTTTTAATTGGTTCGAAATTGAATTTATCCAAAATGATTTGGAACATGCATTAAGAAATTTTAACTGTCATGTCT TGGCAGAAGGATGAAATAAAGTATGTCCAAAATTTTGGAATTTAATATTTATGATCTTTCTCATAAGCACCTCAAGAAAAATAATTCTTGTTTCTCTCAA TTCAAAAACTACTATTCAATCTAAAATGCTAGGTCCGTCCATTTTTTGTATATTATTCTATTCCTTTATTGAATTGTTTATATTCACTTATCTTTTTTGC AGCTATGAAGTTGTTTTCGCCTTTCATAACGAAAAGTACCGGGTGCATGGTCCAATCTATTATTATGTGTTCAATACTCTTCTATTCTCCTTGCTTGTTC TTAATATTTATTGGTGGGTGCTGATGCTTCGGATGCTTGTTAAACAAGTTCAATCAAAAGGAAAAGTTAGTGAAGACATTCGGTCAGATTCAGAAGATGA GCATGAACATGAAGAATGAGCAGGAATACATGATTGAGTGGCATCAAAATTATGTAAAGCTCACCATATTTATAGTGTAAACTAGAAACACCTTATCAAA TTATTTCTGCTGCTAGTTCATGCTAGCAGTCAAAAGCTTAAAAGGAAATGCCAAGAATGATAAAGAATTGTTCCATGCACAATGAACATAAATACCCAAC TCTTATCTTATATTTGTTAATATGCTTTAATCCAACTCGACCTTTCTATGACTCAACTTTCAATTAAACATACTTATTATG BLAST |
Tissue | flowers |
Gene name | LI_gene_42652; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_238773
Blastp | LAG1 longevity assurance homolog 3 from Arabidopsis with 76.57% of identity |
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Blastx | ASC1-like protein from Lycopersicon with 71.21% of identity |
Eggnog | ceramide synthase(COG5058) |
Kegg | Link to kegg annotations (AT1G13580) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461038.1) |
Pfam | TLC domain (PF03798.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |