| Id Trinity | FTRINITY_DN54438_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_236782 |
| Sequence | ATGAAATTAAGTTGATTGGATCACGCGCATGGCAAAAAACGCACGAAAGAGTATATAAAAGAAAGTACCTCACACAAACATGTCTCAGATAAACAAAAAC AACTTTCAAACCCTAGCGATTGCGAGTTGAGATGGCTTCAAAACGTATTACTAAGGAGTTGAAGGACCTACAGAAAGATCCTCCTGTTTCCTGCAGTGCT GGTCTGTTTTTGCTGGCCTTCTCTTCCCGTCTCACTATCTTTATACTACATACTTACCCCTATTCTTTCAATATCTAACAATGTTGTGTGCATATAAATA CCAAATTTATCTCGAATCGAAATAAATTAATAAAGTCTCTTGGTACTTCTATGGCGTTCTACTTTGTAATGAGTATGGATACTCATATTTTTTTACTCCT TTTTTATTCTGTTTTTTCTTCTGGCTATTAAGCTATTTGTCATTTTGGATTATAACATGATTACTAGACTTGCCATCAAGTTTAAATTCTCTCAACTGAT TTGAAGTGGCTTATTTATGAAGGAGTTCTGTTTTCAGTGGACAAGATACTCAAATAATATGTTGAGTAAATTGAGTTTTGCTTAAATAGAAGATATTATG ATAATAAAGAGTTGTTTAATATGGGCTTGGCTTTTACACCATTTTGCATGCATGGTTTGGAAATCTGAGGGGAGAAAAGGATGCTAACAAGGTGACTGGA AATAACTTTGATGCATACACTATTTTAAAACAGAAAATGTCTGAAGATAGACAAGTTGATTATTGTACATGGATTACAGAGTGAGTGCAAAGGCATTTGT TGATAATAGAAGACGCTATGTGTATATCTTACGTATTTTCCAACTTTTGATTGCTTATTCATGTAGTAAACTCCAACGGTGAAGTAGGTTATTTGGTTGA GATGAAAATAGGAATCATAAAAAAATATATAATGAAATCTCTTTATGGCAGGAGTATCTTACTCTGACAGTAAGGGAATAAATTTTAATCATTGATTATG CATGTATGGTCAAGATAAAAACATAAAATAATGCAACGAAGGGTTTCTCCGTTTTGTATTGACAAGCTATCATAATCATTATATTCTACATACATGCAGG CCCTGTTGGTGAAGACATCTTTCATTGGCAAGCTACAATCATGGGTCCAGCAGACAGCCCTTATGCTGGTGGTGTATTCCTAGTGACAATTCACTTCCCA CCAGATTATCCATTTAAGCCACCAAAGGTTGCCTTCAAAACAAAGGTATTCCACCCCAACATCAACAGCAATGGAAGTATCTGTCTTGACATCCTGAAAG AGCAATGGAGCCCTGCCCTTACAGTTTCCAAGGTTCTGCTGTCAATTTGCTCCCTGCTGACAGACCCAAACCCTGATGACCCTCTAGTTCCAGATATTGC TCACATGTACAAGACTGACCGAGCCAAGTACGAGAGCACGGCCCGTTCTTGGACTCAGAAATATGCCATGAACTAGTTGACCTATGCTTATGGTTCTGGT GGGCAGTTTATGTGCAAAGAAAGTTGTCGAGAAATATCAGCTAGTATATATTCATATGAATGGTTCTTCCGCTTTGATTTAATAATAATTCCAACTCAGA AATGTTTAGCTTTCATGGTTAATATGGCAAAGTCTTCAGAATGGGTTGCATTTTTATTTGCTTTGAGATTTCAGTTTTTGCCCTCTTTTCTTAATTTTGT AGTTTAATGAGAAGCAAAATATCAAGGCCAAATTTCAATATTAAGCTTCAGTTTTGCAACATCAAGTAACATAACATGTTATTTTTCAAGCATATAGGTT AATATTTATGCACATGTACTAAATGTTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_42667; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_236782
| Blastp | Ubiquitin-conjugating enzyme E2 5B from Oryza sativa with 95.5% of identity |
|---|---|
| Blastx | Ubiquitin-conjugating enzyme E2 28 from Arabidopsis with 92.86% of identity |
| Eggnog | ubiquitin-conjugating enzyme(COG5078) |
| Kegg | Link to kegg annotations (4328940) |
| CantataDB | Link to cantataDB annotations (CNT0002933) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_013466022.1) |
| Pfam | Ubiquitin-conjugating enzyme (PF00179.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |