Ll_transcript_238463

• Id Trinity: FTRINITY_DN54443_c0_g1_i6
• Name Transcript: Ll_transcript_238463
• Sequence: GCATATATGAGTGAATGAGTCAATTATGATGTCTGTCAGTGTTCATATAAATTTACCAATTTGGAAGTAAAGCTAATTGAGCTGAGAAAAGATACATCAA AATCTTCTGAACATTACCTTTGAGAGAGAGATGGCTATACCAGACCCAACATCTTTTCCAAATCTATTTCAGAGGGTTGCTTCAGCACAGTTTAGAAGGC CTCTCCTTCATTTAGTGTCCACTCAAGAAAATAGACATAGATACCTAACTCAATGTGTTCCCCTTCACAAAGCAGCACTGAAAGGTGACTGGAAAGAAGC TAGTAAAATAATAGAACAAGATAATACATTGCTGAAAGCAGCCATAACAAAGGGTTGGGCCACAGTTCTTCACATAGCAGCAGGAACAAATCATGTTCAC TTTGTGGAGGAACTAGTGCGAAAATTGAAACATGAAGATTTAGAGTTGGAAGATGAAAAATCAAACACTGCATTCTGTTTTGCTGCAGCAGTTGGGAATG TTGAAATTGCTAAGATAATGTTGAGAAGGAATGAATCATTGGCACAAATAAGGGGTGGAGAAGGATTAACTCCTCTTCACATGGCTCTTTTACAAGGAAG AAGGGAAATGGCATGGTACCTGTTACCTAAATCTAAAGAAATACTTCAAGAATTAGACTGGAAGGTGTTGTTTCACATTTGTATAAATTCTGAACTCTAT GATTTAGCCTTGGAAATGCTAAAGGAAAAGAAAATGCTAGCTTTTGCTCCAATTGGAGATACTGGTGAGACAGGTTTGCATGTATTGGCCCGAAAGGCTT CAGTTTGTTGTTGCCAAAGTCTACAATATGGAAAACACCTCTTGCATTTCTGTACAAATGATACTTTCATCCTTAAACTCATCAACTTTATGTGGAATAT ATTTCTTACCGAGTTGGATGATTCAACATTAATGAATGCCATAAGACAACCTTCTCAAGTAACATTTATTGCTGCTGAAGTTGGAAATTTTGAGTTTTTA TCTGTTGTTATTAGCACTTACCCAGATTTGATATGGGAACTAGACACAATGGGTCGAAGCATAATTCACACTGCTGTTTTGCATCGTCATGCTAGCATAT TCAATTTAATACATGAAATAGGCCCAATGAAAGATTTGATTCTAACTTTCGTAGATGATGAAAGGAATAATTTATTGCACTGTGCTGCAAGATTAGCTCC ACCAAATCGACTTAATATTGTTTCTGGAGCAGCTCTTCAAATGATGCTCGAGTTATCATGGTTTGAGGAGGTGAAAAAAATAATGATACCATTATTCATA GAGATGAAAAATTCTGAAGACTTCACTCCTCGCCAAATATTCACCAAAGAGCATGAAGAGTTACTAAAAAATGGAGAGTCTTGGATGAAGACTACAGCAA ATTCTTGCATGGTGGTTTCAACACTCATTGCTACTGGAGTGTTTTCTGCTGCATTTAGTGTTCCAGGTGGTAACAATGACAACACAAGAAGTCCCAATTA TATGGAGAAACCAGCATTCCTAGTATTTGTTTTGTCAGATGCTATAGCATTCATCTCATCTTCAACATCAATCATAATTTTCTTGTCCATTCTTATGTCG CGATGCGCTGAGGAAGATTTTCTCAAGTCATTGCCATTGATGTTGATATCAGGACTAGTAGCATTGTTTATCTCAATCATAAGCATGATGGTAGCATTTA GTAGTGCCTTTTTCATAACATATTACCATGGACTGAAGTGGGTACCTAACTTCATTTCTGCACTTGCATTTGTACCAATACCCTTATTTATATTCTTGCA GTTCCCTCTCTGGTCTGATATAGTTTATTCAACCTATATTTGTAGCTCTCTCTTCAGACCAAGTAAACGTATGATTCACTAGAAAGATGGAGCTTTATTG AATAATTAATTTCAATTTCCTAAAGTGTGTGCCTTCTCCTTGAGTTATAATGGCGAACGTCAATGTTCCCAACGTCAATGTTCCCAA
• Tissue: flowers
• Gene name: LI_gene_42719;
• Additional information: details;

Expression of Ll_transcript_238463

FPKM

• FPAB: 9.8
• FPNAB: 5.8
• LF1: 0.7
• LF2: 0.3
• LF3: 0.6
• LF4: 0.5
• UF1: 0.6
• UF2: 0.3
• UF3: 0.4
• UF4: 0.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_238463

• Blastp: Ankyrin repeat-containing protein At5g02620 from Arabidopsis with 23.09% of identity
• Blastx: Delta-latroinsectotoxin-Lt1a from Latrodectus with 28.28% of identity
• Eggnog: Ankyrin Repeat(COG0666)
• Kegg: Link to kegg annotations (AT5G02620)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418119.1)
• Pfam: Ankyrin repeats (3 copies) (PF12796.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;