Ll_transcript_237344

• Id Trinity: FTRINITY_DN54450_c0_g1_i3
• Name Transcript: Ll_transcript_237344
• Sequence: CCATGATAGCATGCAATGATGTAAATCGCATGTATACCCCCAAACAAAGCTAACCTACTCATGACCTCCCCTTGATATCTATCACAGACGAATGATATTC CATGCTTCCACGTTTTTGCACAGTGGTCCTTTCTCATCAATACACAAATATATAAAAAAAGAATACATAATAAACGACATTAAAAAAAGAGACGTAGAAG AAAAAAACGAATAAACCCAAATTCGCATCATCTTCTAGATCTGCTATCTCTTCGTTTCTTCCATATCCTTTCAATTTCAATATCAATCCTCCTTCTTCTC CATCTCCAAAGTGGAATCCCTCTTCACAGGTTGTGAATTGAATGGAAGGAACTGGAGGTAGCAGTGCCTCAGCTGCTGCACCCGTGAACCAATGGTTGCT GGAATTTTCGAGGCGATTTCAGCATTATCTTGATAAATCAACCCCACACTCTACGTATAGATGGATCGGGACTGTTGGTATTGCGTCAATCTATGTTTTG AGGGTTTTTTATTTACAGGGATTTTACATCGTGTCTTATGGTCTGGGAATCTATTTGCTGAACCTGTTGATTGGGTTTCTGTCACCTTTGGTTGATCCCG AGCTGGAGCCTTCTGATGGGCCTACGCTGCCAACTAAAGGTTCTGACGAGTTCAAACCATTCATTCGCCGGCTTCCTGAGTTCAAATTTTGGTAATTTAG GAATTTAGTTTTATGCCTAATGCATTATCATAATTGCTTCAAAGTCTTCCTTTGTCATTTTAAGTTCCTTTTATTTTTTCTAGAAAACTTTGATTAAATT TGTAATTCATGTTTATATTTGGTGCTCCAATGCTTGTTGTCTAGGCACTCACCTTTTTCGTGATTTGACTTGTAGTAACTTGTCTATGGTAATCTGTCAT ACCATGTATGACTCTGATTTCTGAATTCCAGCTGGTAGTATAAGTTTGCACACCTAAGATCTAATAGCCATCTAGTAAGTTTCCCAAATTTTCCATTTAC TTTTCAAGAAAGCATTTGATTGATCATTGGAAAATAACTCCTACCTTCAGAAAGATGGAAATATTAACTTGCTATTTCTTGCTCCCAGCTGCCATAGCCT GTCACTTCAGCTAATTGTTATCGGCTTCTGGCTTCCGGAGCCTGTTGGTCATTGCACATAGCAAAAGATGTTAAGATGTTTACTTGGAAATGCTTCTTTT TATTTTTTTATTTCAAAGTTCCTTAAAATATAAGCCTCACTGATGGCTATATTTTCCTGAAACATAAACATCCAGATCAAATTATTTGGCCTTAATTGTC TGCACATAAGAAGCACAGAGGCTTTACAGTGGTTGCTGGGTTGTATCCATGTCAAACACATCTGTATCTGACACTCCCGCCTATACTTTTACGATGTTTT ATATCTACTTTTTGGATATTATACCATTATAGATCGGAATGTCACAATGATTAGCTAAAGATTAGCATTTTATTTTGTTTACAATGGCTCTTGCTAAGTT TTCTAACTTTAGTTTTTTTACTTTAGATTCATGCTTTCATGTTAATCTTATATCAATTTTATATCTTGTACCATAGTCGCGATAACATTTGAAATACGTC ATAGCCCCATGTTCCTGATGTGTTGGGTCCATGTAACATGTTGTTCCTTGCTTTCATTTCCCTGGCAAATTTCATGTTTTCACAAAACCATGGTTTTAAG AATGCAAGTCACTAAAAGTTATGGCCAGCCTCTATTTCACTGTTAATTTCATTGCTATTGTTGGTGCAGGTATTCTTTCACGAAGGCCTTATGCATAGCA TTTGTGATGACTTTCTTTTCCGTATTTGATGTTCCTGTCTTCTGGCCTATATTACTCTGTTACTGGATTGTTCTGTTTGTTCTTACAATGAGGCGCCAAA TTGCACACATGATCAAATACAGATACATTCCATTCAACCTTGGAAAGCAGAAGTATGGTGGCAAGAGATCTTCTGCAAGTAGCAGTGGCACCCGTGCAGA CTGATACTCGTCCGATTAATGATTTGAAGCATACATATCTCGAAGTTAGGTTTTGTGAGCATTCAGGGTAGTGCAATTTCCCCCTTTATTTGAAGGAATT TGTAGTCGGAGTATTATGAATGCCTTATATGCAGTTACAGAAAATCTTGGTGTGTCCACTAGTTATTTGAAACCAGAAGACATGCAAATATTGGCAGTGA ACTTTTTTATGGTCATATACATCAGTATTTGTTTCAGTTTTAGATTTTATTGCAAATGTATTCTTGTATTGTTATGCTGTATTTTTTCCCTGCCTGGTAT TTTATACTATTTTGAATGCAAACTTTTACCAGCGTCTTCTTTTGTTTAGAAAATCATACTGATAAGGATGTGATGGACTGTTAAAATTGTCACTTGATGT GTGTTTTTCTCTCACTCAAAAGTAACTTCAATTTTGGGCACACAGCTTATTCTGATGCAGCCCAACATAAAAGTAACTTCTACTGCAGTGCCTGAGATAC TGAGATGAGTTTAACTTTGAACGCATGCTTTATAATTTGGTCGGGCATTTACTCTGAACCTGATTTTAATATGATTCAATAATGACTAGGTTTGAACTTG GTTTATTCCAAGCATATATAAAATAAATGTTTTTGCATTATATTTGAC
• Tissue: flowers
• Gene name: LI_gene_42795;
• Additional information: details;

Expression of Ll_transcript_237344

FPKM

• FPAB: 3.1
• FPNAB: 0.4
• LF1: 4.7
• LF2: 6.5
• LF3: 7.7
• LF4: 7.3
• UF1: 7.8
• UF2: 7.1
• UF3: 8
• UF4: 8.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_237344

• Blastp: Protein RER1B from Arabidopsis with 73.5% of identity
• Blastx: Protein RER1B from Arabidopsis with 80.77% of identity
• Eggnog: RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)(COG5249)
• Kegg: Link to kegg annotations (AT2G21600)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413892.1)
• Pfam: Rer1 family (PF03248.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;