Ll_transcript_237350

• Id Trinity: FTRINITY_DN54450_c0_g1_i9
• Name Transcript: Ll_transcript_237350
• Sequence: CCATGATAGCATGCAATGATGTAAATCGCATGTATACCCCCAAACAAAGCTAACCTACTCATGACCTCCCCTTGATATCTATCACAGACGAATGATATTC CATGCTTCCACGTTTTTGCACAGTGGTCCTTTCTCATCAATACACAAATATATAAAAAAAGAATACATAATAAACGACATTAAAAAAAGAGACGTAGAAG AAAAAAACGAATAAACCCAAATTCGCATCATCTTCTAGATCTGCTATCTCTTCGTTTCTTCCATATCCTTTCAATTTCAATATCAATCCTCCTTCTTCTC CATCTCCAAAGTGGAATCCCTCTTCACAGGTTGTGAATTGAATGGAAGGAACTGGAGGTAGCAGTGCCTCAGCTGCTGCACCCGTGAACCAATGGTTGCT GGAATTTTCGAGGCGATTTCAGCATTATCTTGATAAATCAACCCCACACTCTACGTATAGATGGATCGGGACTGTTGGTATTGCGTCAATCTATGTTTTG AGGGTTTTTTATTTACAGGGATTTTACATCGTGTCTTATGGTCTGGGAATCTATTTGCTGAACCTGTTGATTGGGTTTCTGTCACCTTTGGTTGATCCCG AGCTGGAGCCTTCTGATGGGCCTACGCTGCCAACTAAAGGTTCTGACGAGTTCAAACCATTCATTCGCCGGCTTCCTGAGTTCAAATTTTGTAACTTGTC TATGGTAATCTGTCATACCATGTATGACTCTGATTTCTGAATTCCAGCTGGTAGTATAAGTTTGCACACCTAAGATCTAATAGCCATCTAGTAAGTTTCC CAAATTTTCCATTTACTTTTCAAGAAAGCATTTGATTGATCATTGGAAAATAACTCCTACCTTCAGAAAGATGGAAATATTAACTTGCTATTTCTTGCTC CCAGCTGCCATAGCCTGTCACTTCAGCTAATTGTTATCGGCTTCTGGCTTCCGGAGCCTGTTGGTCATTGCACATAGCAAAAGATGTTAAGATGTTTACT TGGAAATGCTTCTTTTTATTTTTTTATTTCAAAGTTCCTTAAAATATAAGCCTCACTGATGGCTATATTTTCCTGAAACATAAACATCCAGATCAAATTA TTTGGCCTTAATTGTCTGCACATAAGAAGCACAGAGGCTTTACAGTGGTTGCTGGGTTGTATCCATGTCAAACACATCTGTATCTGACACTCCCGCCTAT ACTTTTACGATGTTTTATATCTACTTTTTGGATATTATACCATTATAGATCGGAATGTCACAATGATTAGCTAAAGATTAGCATTTTATTTTGTTTACAA TGGCTCTTGCTAAGTTTTCTAACTTTAGTTTTTTTACTTTAGATTCATGCTTTCATGTTAATCTTATATCAATTTTATATCTTGTACCATAGTCGCGATA ACATTTGAAATACGTCATAGCCCCATGTTCCTGATGTGTTGGGTCCATGTAACATGTTGTTCCTTGCTTTCATTTCCCTGGCAAATTTCATGTTTTCACA AAACCATGGTTTTAAGAATGCAAGTCACTAAAAGTTATGGCCAGCCTCTATTTCACTGTTAATTTCATTGCTATTGTTGGTGCAGGTATTCTTTCACGAA GGCCTTATGCATAGCATTTGTGATGACTTTCTTTTCCGTATTTGATGTTCCTGTCTTCTGGCCCATATTACTCTGTTACTGGGTTGTTCTATTTGTGCTT ACAATGAGGCGCCAAATTGCACACATGGTCAAATACAGATATATTCCATTCAACCTTGGAAAGCAGAAGTATGGTGGCAAGAGATCTTCTGCTGGTAGCA GTGGCACTCGTGCAGACTGAAACTAAGCTGTTCCATGATTTGAAGAATGCAGATTTCAAAGATAGGTTTTGTGAGCATTCAGGGTAGTATGTAGTCAAAA GTATTATGAAAATCTTATTGTGTCCACTAGTTATATGATACTGGAAGACATGCTAATGTTGGCAGTGAACTTTATGTTCATATACATCAGTATTTGTTTC AGTTTTAGATTTTCTTGCAAATGAATTCTTGTATTGTGATGCTTCTCTTGCCTGGTATTTTTTTCGATAATCCAAAGGCAAACTTTTAGCAGCCTTTTCA TTTTTTCAGAAAATCTTACTGTTAAGGATATGATTTTGAGTGTTAAAATTTCCCCCACTTGTGATTTGTCAAAAATGTAATGTGCATTTAAGAATTAGCC GAATTTTATGCACATGCAGCTTATTCTGATGCTGCCAATTCCAACATTAAAGTACCTTCTGTTGAAGTGTTTGTGATTAGAGTTGAAATTGGAACACGTG CTTTATATTTTGGTCGAACACTTTTTACTTGCATTTCAACCTGATTCTAATAGAATTACTAGGTTGCTGACTTGCTGGACCTGAGTTTGTTCAATATATG TTGAGTTTAAGGGATGTGAACTTAAGGTGTATAGTTTTTTACACTATTTTGAGCGGCCATTGATGTGTATTATTTTTAAATTGACATAATGCATAATTGT AAATGTTATAGCGGTTCAACTTTTTGGTCCAGAAGATTGATTGTTGATGCATAATAAGGCTTAAGCATAGATCAATGAGGAATCAATGGTGAGTGTAGAT CAATAAGGAAACAGTGTTGATATTCTATTTTTATCATTGGATTCGTTTGCTTTTCAGAAGATTGTTGCTTAAACTTGTCGCATATACTATTACAAATCAA ACGTGGGCAATTCGATGAAATGTTCTCCTTGCTTATGAAAACAAATATATTATATGAAACCAAAAATGTTTCCAC
• Tissue: flowers
• Gene name: LI_gene_42795;
• Additional information: details;

Expression of Ll_transcript_237350

FPKM

• FPAB: 11.9
• FPNAB: 7.9
• LF1: 9.2
• LF2: 8.3
• LF3: 7.7
• LF4: 10
• UF1: 10.1
• UF2: 8.8
• UF3: 10.6
• UF4: 13.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_237350

• Blastp: Protein RER1B from Arabidopsis with 73.28% of identity
• Blastx: Protein RER1B from Arabidopsis with 80.77% of identity
• Eggnog: RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)(COG5249)
• Kegg: Link to kegg annotations (AT2G21600)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413892.1)
• Pfam: Rer1 family (PF03248.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;