| Id Trinity | FTRINITY_DN54460_c2_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_238839 |
| Sequence | CACTGACAGTGTAAAGATTTATACACTTCATTATCTATCATTCATTTGTATTACTTTTTCTGAAAAGTAGAAAATAATAATAAAAAATCAATGGGATAAT GCAATGAGAGTATATAAAACTCATACAATTTTTCTTGGTTACTTATTTTAATTGTTTAGATATTAACTGATAACAGTTTTTGAATCATCTGGATCGCAAT GTCTTGGGCAACTGCATTGGTGAGGATCTCTCCGTACACCTTCTCCGCCATCGGCATCGCCGTCTCTATCGGCGTCTCCGTCCTCGGCGCCGCCTGGGGA ATATACATAACTGGTAGTAGTTTGATTGGTGCTGCAATCAAGGCTCCACGTATTACTTCCAAAAATCTCATCAGCGTAATCTTCTGTGAAGCCGTCGCTA TATATGGTGTTATTGTAGCTATTATTCTACAAACAAAATTAGAAAGCGTTCCATCGTCAAATATCTATGCACCTGAGTCTCTTAGAGCTGGATATGCAAT CTTTGCTTCTGGAATTATCGTCGGCTTTGCAAACCTTGTTTGCGGGTTGTGTGTAGGAATAATCGGAAGCAGTTGTGCATTGTCTGATGCTCAAAACTCC TCTCTCTTTGTGAAGATTCTTGTGATTGAGATCTTTGGTAGTGCACTTGGACTATTCGGAGTCATTGTTGGAATTATTATGTCAGCTCAAGCAACATGGC CAACAAAAGTTTAGTTTTTCGTTACGTCGGAGCGCCGGAATGAAGAAACTATAGTAGAGTGCAATATGTTTTTAGGAATGTAAAATCCCTCCATCACAAT TTTAGGCTGTATTATTTACCAGTGAGTTGTTAGAATGTCTTGTGTATCATCAGATATTTGAATCTGTTGGTTCAGTTTCAATATTCTTTGGAAGACTAAA CCTTTTGTGGTTGTTCATTTGTCAATTAAAAATGTGAAATTATTTGGGCAATTGAGTAAACTCAACAAACATGTTTGTTGAAATCTGTGGTCTCAATTTG AGTTCAGTTGTGTTCTGAAGTTTGTTTTTCATGGGCAATAAGTTCAAAATCTATGAGAATGGTGGATTCCAATTGTTAGTATGGACAATTTGGAAAATAT AATTAAAGGGCATGTATGGCTTGGTTCCATGTGTATATTTGATATAAACTATGTACTGAGTTTTGAAATTGGTACTGCATAACATGTATGATCTGAATAT TCATAAGTGGAGCTTGAATATTTATATTTATTTTCACCAAAAAAAATAAGTGTAAGATTATGATTATATTTTGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_42833; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_238839
| Blastp | V-type proton ATPase subunit c''1 from Arabidopsis with 94.67% of identity |
|---|---|
| Blastx | V-type proton ATPase subunit c''1 from Arabidopsis with 94.15% of identity |
| Eggnog | F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (By similarity)(COG0636) |
| Kegg | Link to kegg annotations (AT4G32530) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_016183543.1) |
| Pfam | ATP synthase subunit C (PF00137.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |