Id Trinity | FTRINITY_DN54460_c2_g1_i7 |
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Name Transcript | Ll_transcript_238844 |
Sequence | CAAATATCATATCCACAATTTTAATATGACGCACATGTGACGAAACTGAAGAGTTCTCCATGCAATAGCAATCGATTAACTATGTATATCATATAGTATT CATACTTCTTCGCAATATTATCTGCGCACTTAATCATTTTATTGATAAACTATAGTTTAAAGCATGGCCTAACTACAGTGCTTTCTGCCCACTACTTATG TTTATAATAATCTCTCTAAAAGAAAGCAAATTTGAGGAGCAGACAAAATGAGTAGCACCACTTCAATTTTCATGGTCTCAACTTTGTACATCCTCTTATT GTTCCTTCCTTATCACATGTCAGCACATTATACTAACAAAGCTAAACTAAATTTCATCACTGGACATAGTGGCCAGAGGAGTAAAGGTGGCGGCGGTGGC GGAGATGGTAAAAAATCACCAAATATTGTAGCAGCTCCAGCTTCACCTCTCAAAGCAGAAGCTCTTGTATTTAAAGACCAAAGGCTTCAAATAGTGTACC CAGTAATACAAAAATTCAAGTCCATCATCACTTCAGATCCCTTAGGAGTTACAAAATCATGGGTTGGCTCAGATATATGCAGTTACAAAGGGTTCTATTG TGATACTCCACCAGACAATTCATCTGCTATTGCTTTGGCCTCAATAGACTTCAATGGTTTTCAACTTGGTGCTTCTACCCTTGATGGTTTTATTGATAAT CTTCCTGATATTGCTCTATTTCATGCAAACTCCAATAATTTTGCTGGCACTATCTCATCACAAATTGCAAAACTACCCTATCTATATGAGTTTGATGTAA GCAACAACCAATTGTCTGGTCCTTTTCCTATGTCTGTTCTAGGAATGGAAACTTTATCATTCTTGGATATAAGGTTCAATTTCTTCTCTGGGGGAGTTCC ACCACAAATATTCACACAAAACCTTGAAGTACTTTTCATAAACAACAATATCTTCACTCAAACTTTGCCAGATAACTTAGGCACTACTCATATTCTCTTA CTCACCTTAGCAAACAACAAATTCAATGGTCCAATACCAAGAACCCTTCCAAAAGCTTTGTCCACTCTCACTGAGGTTTTGTTACTAAACAACCAATTAA CAGGTTGTTTACCTTATGAGATTGGTTTTCTTGAAGAGGCCAAAGTGTTTGATGCTGGAAACAATGAATTAACAGGTCCTTTACCATTCTCTTTGAGTTG CCTTGAGAAAGTGGAGTTTCTCAATTTGGCTGGTAATCTATTATCTGGCATGGTGCCAGAAATGGTGTGTGCAGGGTTGGTGAATTTGGTCAATTTTTCA TTATCAGATAACTATTTTACCCATGTGGGACCCTCTTGTAGGATCTTGATTCAGAGAGGAGTTCTTGATGTTAGAAACAATTGCATTCCTGATCTTCCAT TTCAGAGATCAGTGATGGAGTGTGCAACTTTCTTTGCACGACCAAGAATATGTCCTTCCATGTGGTCTTATGGTTTTATCCCTTGTAAGCTTCCTTCAAT TCCTTAGATGGAACAATTTCTTCTCTTTTACCTTATAATTTTGCTCCATGTGCTAAGGCATGGGTTGCAATTCTTTGTCTTACTTTTTTTTCTGCATGTG TAGTGTATGATTGTACTCAACTTTGTAATGGTCCATCCACTTTCTAATAATAATAATAATAATAATATATATATTCTTCAATGTTCATATTCTTGAATCT CCAATCTTGATAATATTCTGTGTGATTAGATCGAAAGAACAATGTCTGGTTACGCGATGATGGGAGAATCAAGTTCATGGGGAAGTGCACTTGTTAGGAT CTCTCCTTATACATTCTCCGCTCTCGGAATCGCTATTTCTATCGGCGTTTCTGTTCTCGGTGCTGCTTGGGGGATTTATATAACTGGTAGTAGTTTGATC GGTGCTGCAATCAAGGCTCCACGAATCACTTCCAAGAATTTAATTAGGTATTCTATCATCATTGCTTTTTTACCGATTTGCCCCTATTCAATTTTCAATT GTTGTTTGTGCTTGTGTTTATATCGTTGATAACTGTTTTTGTAATGGATACATTTGTATTGATTTTGTTTTATGTTGATTTTGAATGATGTGATTGGTTT TAGATGATAGCGAAACGTAATTGCGTATCGTCGCGATTTTAGATTCTGTTGTGGATTAGATGCATTGTAGGAGACAAAGAGGAGAATGGTGTTAGTGTTG AGAATTTCAATCTAAACAAAATCTTACTTTCAAATGTTGTTTTTTTTCTTTCCGGAAACAAGACTTTTTGAGCCGAGAATTTTAACGAAGATTTGTATGT GAATATTCAATTACGGATCATGGACCCAAGTTAATTGTGGCAGGAACAAAAGGGGTGAATGGATTCAACTAAGGCTGTAGATGGCAAAACGGGCAAATCC CGTGGGCTCGCCTGTAGAAGCCTACAAAATTTTGCGTAATTAACCTCTCTGTCGTGCAAACTTCTTAAAGAGTGGAGATTCCAATGCGTAATTAACAAAG ATTTGTATGTGAATATTCAATTAGGGATCATGGACCCAAGTTATTAAACTTCTTAGTGTGAAATGAGTCTGATTTCCCAACTTTAAAAGAGGCTTCAGTA ATTGGCGTTGTTGATTGAGCATATTTTTTTTACCAGTGAATGGGAATTGATGGTTGGAATTGTATTACAGTTACCTTCCATGTCATGTACCATTCACACG TAACAATATCTCACTGACTCTAGGGTTTAATATCCACCTTCATTTGGGAGCACCAGTCATACTGATAAACTTCTTTCTAAAGAAAGGCCATTTACTTATT TGGTCTCTATCTACGATGCTGCATGGCTGGTGAAATTCCATATGTTGACTTGGTTTTCCCTCTAATATTTGCCTTGGCTCATTTTCTTTGAAAAAACCAT TATATCGAAAATGTTTTTGATTGAAGATGGCTTCCTGAAAAACATTTTCTGTAAGAGATTTTTCTAAACAACATTCAGTTGAATTAGTTTTTCGTACACG ATGCTTTTGCTCAAGATTTTCTTTTATTTGCCTCATTAAAAGCTCTTTGATATAGCCCAGTGAAGTACATTGATCCTTGAAGCTGACTCTGCCCACTTTT ATAACTGTACAAGGCATGGTTTTTATTGTTGCTTTTTTTTTCCCAAAGTGGTTTGTCTTGTGTGTAGTGATTAACTAGAAGAGTGTTTTTATTTGATTGT TACCGAAACTTCTGAAAACATTTTCTGGAAAAACAATTTTCCACCAAAAGGAGGACATTTTCAGGAAAATTTTCCCACACCACCAACATCAATTACAAAG TGTGTTTCTGTTAAACAAGCATACAAACTACATAATATAGTTTTTGGTGAGGAAATACCTTTGATGTTAGGTCGAAAAAGAAGCTGATTGATATTTATGA CATGTAATAATTAAAGTTCATTTTAGTTTACTCCTCTGTATGTGAGGGGGAAGATGGTGATTGTGTGGTTGGGTGTTATTTGACCTTTTTTGGCTTTTAA TGTCAGTTGATAATATAAGGTTTCGTTTGCTCAAATCAAGTAGCCAATAACAGCCAAAGCCTCTTTCTACTAGGCTTTGTTGATTGATCATATAATAAAG GTTTTTTTACTTCCATGGAAATTAAATTCAGAAATGTCGTTCTGAATGTCTGAACTTGATATTGTTCAATTGGATGCTGTGAACGTTGATGTTCCTTTTT ATAGGTATCTGCATCAAGTATCTTGATGCAGCTGATATAGTTCCAAATATGTCTCATGTGTGCCACTTGACGTATGGTTCTTG BLAST |
Tissue | flowers |
Gene name | LI_gene_42833; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_238844
Blastp | Uncharacterized protein At4g06744 from Arabidopsis with 64.23% of identity |
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Blastx | Uncharacterized protein At4g06744 from Arabidopsis with 64.23% of identity |
Eggnog | NA(ENOG410YFAF) |
Kegg | Link to kegg annotations (AT4G06744) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447133.1) |
Pfam | Leucine rich repeat N-terminal domain (PF08263.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |