Id Trinity | FTRINITY_DN54471_c1_g1_i3 |
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Name Transcript | Ll_transcript_238693 |
Sequence | CCTTATGGGGTTCCCTGTATGGTGGAAATATTTCACTTCTTGTGTTCTTTGTTGAATGTTGTTGAGCATGTGGGAATAAATCCTAGATCAAATACAATCG CATATGATGAAGATGTGCCTCTTTTTGCCTTAACACTGATTAATTCAGCCATAGAGTTGGGAGGACCCTCCTTTCGCCGTCACCCAAGATTGTTGAGCTT AATTCAAGATGAATTATTCCAAAATATTATGCAATTCGGTTTGTCAATGAGTCCCCTTGTACTTTCAATGGTGTGTAGCATTGTTCTAAATTTGTATTAC CATCTTCGTACAGAACTCAAATTACAGCTAGAAGCATTTTTTTCTTGTGTAATTTTGAGGCTTGCACAAAGCAAGTATGGAGCTTCATTTCAGCAACAGG AAGTTGCCATGGAGGCCCTTGTTGACTTTTGCAGGCAAAAGACATTCACATTGGAGATGTATGCTAACTTCGACTGTGACTTAACATGCAGTAATGTCTT TGAAGACATATCTAATTTGTTGTCCAAAAGTGCATTTCCTGTGAACAGTCCACTGTCTTCCATGCATGTTCTT BLAST |
Tissue | flowers |
Gene name | LI_gene_42922; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_238693
Blastp | ARF guanine-nucleotide exchange factor GNOM from Arabidopsis with 85.34% of identity |
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Blastx | ARF guanine-nucleotide exchange factor GNOM from Arabidopsis with 85.34% of identity |
Eggnog | and Sec7 domain(COG5307) |
Kegg | Link to kegg annotations (AT1G13980) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019433110.1) |
Pfam | Guanine nucleotide exchange factor in Golgi transport N-terminal (PF12783.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |