Ll_transcript_236403

• Id Trinity: FTRINITY_DN54476_c1_g1_i8
• Name Transcript: Ll_transcript_236403
• Sequence: TGACCATATCCGTATTTAAAGTGGAACATTAATTAAAAGTTTATAATTTGGGACATGAATCATAAAATTAATGGTTGATTTGTTATTGGCATTGCAGCAA TTACACATAATTTAATCGAATCGATGAAGAAGGAGAAGGGAGTGATGATCTCAAGCTCCGTCAATGGCGAAGAAGAAAGCGATGATAAACAACAACAACA ACAACAACAACAGCAGCTAATTAGATTCCCTTCCCGTAACGCTTCCTCCAAATACGATTTCGTGAAGGTTAAGGTCTGGTTGGGTGATAATGCTGATCAC TACTACGTTCTTTCCAGATTTCTCCTCAGTCGAATGCTCACCGTCACCAAGATTCCAAACCATGTTGCTATTAAGATTGCCCTTGAACTCAAGAAGCTCC TCACTGACAATAGTCTTCTTGATGTCTCTCAGTCCGATTTGGAAGCCAATCTATTTAAGCTTATGGAGCGGCGGGGATATGCAGAAGAATACATAAACCG TTATAAGATGATGACAAGATTTCACCACCAAAGAGTTCCATTAGTAATCCTTGTATGTGGAACTGCTTGTGTTGGGAAGTCTACTATTGCCACTCAGCTT GCACAGAGGCTAAATTTGCCAAATGTCTTGCAGACAGATATGGTTTATGAATTGCTGCGCACATCAACAGATGCACCATTGGTGTCAACTCCTATATGGG CTCGAGACTTCAGTTCATCAGAGGAGTTAATAACTGAATTTTGCAGAGAATGCAGGGTTGTTCGCAAAGGTTTGGCTGGTGATTTGAAAAAGGCAATGAA GGATGGAAAGCCAATTATAATTGAGGGAATACATTTGGATCCAAGCATTTATTTAGTGGATGATGAGCATAAATCACCTTCTGGTGTACATTCAGAAAAT AAAGAGATAAATCCAGCATCGCTGGCATTGGATGATAATGCTACAGTTGAAATGAAAAATACTAACGTGGGTAATGGTGATGAGAGTAATGGAGGTTCCA GTATTCTGAGCTCCAACGGGGGAAAATCTGCTCACCAGGTTGATGCAGTATCGAGTTCCATGGCATCAATGGGCATAACTGAAAGCATATCTGCTGGTAA TAAAGGTGCTTCCCTTGTAGAACTGGAGACAGACAAAACTACTATTAGTAAGAAATCAGGTCCCAAACCAATCATTGTGCCTATTGTTCTGAAGATGGCT GAATTTGATCATAAGGCATTACTTGAGGAATGGATCTTCAGCCGTACATTTAAGGATAAATGCCTAGACCAGGCTAATGATAAGCTTATAGCCAACTTGA AAACCATACAGGATTACCTGTGCTCATTCACATCACAGGGGTTGACTGTGGTCAATGTATCAGCAACAACATTTCCTCAAACGCTGGATTGGCTGCATAA TCACCTTCTTCAGGTATGTATATGTGCATGTAATTTGATTGAAAAACTTTGCTTATATATAACATTTGTATTTTGGAACATCTTTTGGTATATTTATCTT CTGGTCAACACTGCTTTATGCTTGATAAAATTAAAGTTTATTAGAAGAGCAAAAGAAGGAGTTTAGTGGAAGAGGATGATAAGATATCATCCTTAATGAA AATGTTAACGACATATCATAATGACTCAATTAAAAGAATCAAATTCTCAAGGACATTTTAAAGAATGTGATCATTAGGCATTCTTATCTGGTTATCAGGT TATGGTAGTGTGAAACAACTGAAACCCATCCTAGTTTTACTATTCTTGTTCCACTTTATACTTAATGAAATTTGTCTTTCTCTCCCTCAAATAGGACGTT GTACCAGTTACAGGCTGATATTATTGATATACTTCCGAAGGCAATTTCATGGCATTGTAGTTAGATTTAATCTTATTCTTCATAATGACTTTTCAATTTG ATTTCTTTCAGTGCATCGAGCAAGGTACTTCATCAGGGTCATGTGAAAATGTTACACAAGAATCTGCAGCATAGTCCTCTTATAATGATTGCAATTATGT CAGGGTCCTTCCCTTCCCTTCCCAATAATTCAGCAATGATTTCTGGATTCAACTTGACTAAGTGGATGATGTTGGAGAATAAATAATCAGAAATGAAAAG GACAAGTAGGATGCTCATTTAAGATCTAAATAAGTAGATGATGTCTCATTATGTGAGGAAAAGATCATTGCTTGGATGAAGAAAGCAGCAGGCACCTATC AAAGTTGTGATTATATTGCATTTAGCAATGTTAGACATGAATAAACAAGGCATGTCTGTCATATTAACTTGATATTTGAAATGATGTTTAAACATGTTAA AGTATTGTATTTCACAATCATTCTTAATGTCGCTATAAAATCAGCAAAAGAGAAGGTCTAATTCATCATTTCTCTCTCCGGAGAAAAAGCATAGATGTCC CATAAAAACATTAAGTAGTTGTTTTATGAGCACATATCTGTATTAGAGTGTAGTGAATTCTTTTTAACACCACCCCTTTTTTATGTATGAACGAAAGAGG AGAGAGAAAGAAGTGATTGATGATTTGTTATGGAAGGAATAGAGATATAAAAGAAAGATAAAATGTTATTGAGGTAAAAGAGAAAAATTGTGAGAATATA AAGTTGCTTTTCGATCAGTAAAGTTAAAACTCTCACTCACCTCGGAATTAGTACAGCACTTTAAAGCCTGAAGAATAGTACTCTGGAACAAATTCAATAT AAATTTATTACTTTACGTATAATGATGTTAATCATTTATGATATTTACATTGGTGTTTTCACTTTCTTGAGCATGTTGAG
• Tissue: flowers
• Gene name: LI_gene_42972;
• Additional information: details;

Expression of Ll_transcript_236403

FPKM

• FPAB: 0.7
• FPNAB: 0.9
• LF1: 0.6
• LF2: 0.8
• LF3: 0.3
• LF4: 0.6
• UF1: 0.7
• UF2: 0.8
• UF3: 0.6
• UF4: 0.7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_236403

• Blastp: 2-phosphoglycerate kinase from Pyrococcus with 32.31% of identity
• Blastx: 2-phosphoglycerate kinase from Pyrococcus with 33.76% of identity
• Eggnog: 2-Phosphoglycerate kinase(COG2074)
• Kegg: Link to kegg annotations (PH0149)
• CantataDB: Link to cantataDB annotations (CNT0002564)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019412846.1)
• Pfam: AAA domain (PF13238.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;