| Id Trinity | FTRINITY_DN54493_c2_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_237866 |
| Sequence | CTTTCATTCAATTAAAAAACCATTTTCTTAATTATGTTGAAATCTGATCTTATTATGTCAATTGTTTAAATTAGGGTTTCTGATTCTGTGAATTCTTCAA ATTAGGGTTTCTGATCCGTATGTTTATGTCAGGTTCAATTGGGGAAATTCATTTGTGGTGAATTATGTCTGCAGCAAAACTTAGGGATTGTGTAACTTTT TTTGGTTGGATTGTGTTTCATAACTCTCATTGACCATCTTGTTGCTGATTGGATCTATTGTTTTCGTGTTTGTTGGTGATTGGTCTGAATGGGATTTCCT CTTTTTTATAGAACAATTATTGCTTTGTGTTTTAATCAGATCAGTATGTGGATCTAGTTAGAAAAATGTCATATTTTTTGTTGCATCTGAAAGCAAGTAT TTTTTGTTATGAGTTTTTATTGTTTTGTTGCTGGCTTCTCTGTATTCTGAGTAATAATTAAAGCTTCCATCTGTTAATGGATTTCTACACTTTACTTCAA TTAAATAACTTGTTTGTATAATTATTACTTAAACCGTAGCATATGTGAAATTTGGTTTAGATAAATCCTCTCAGCTTTCAATGATTTATATTGATATGTT ATTATATCAAATCCCTCAATTTTAGTGATTTCAAGAACAGTAGTTTAGCATCACATATTTATGCATATTTTCCTATTCCAATTGTTTTTTATAATATTGA ATCTAGACATAATATCAAAAGAATACGAACAGTATTATGTTAAGTGCATTGTGTTTGTGCGTGTGAAGTACTTTACTGGATTGCATTGCAATGATTTGCC TATGCTTCTTGCATATTGAAGGAACAAGTGTCACTTATCTAGAATGTCAGGTCATATATAGAGAGTTGGTGTGACGTCTTGAACTCTAAACTGGATTTCG TTGCCGTGTGCCATTCTGATATGGTTTCTTCTTTCTTGGAACAGGGAAATGAATGTGAGTACCGCCATAGCGAGTATGCTCGGGTTAATCCTAGAGATTG CTGGTATTGGTTGAATGGGAATTGCTTGAATCCCAAATGCTCCTTCCGTCATCCGCCTCTTGATGGCCTGATAGGAACACCGCCAGCTACTGCTTCTGGG CCATCTGTGCCACTGTTACAGCATCCAACACCATCTGCAACACATGCACCATATAATTCTAGTAAACCAGCTGTTCCATGCATTTTCTTCCAAAAAGGGC TTTGCTTAAAAGGTGACAGATGTGCCTTCTTGCATGGACCCACTCCTAATACTAGTAATAAAGTAGTTACACAGGCCTCGATGAATAACCAAGGAACTGA GGCTCAGAGTTTTAAGAAGCCATTTGGTAGCATTGAAAAGAATACGCAGGAAAGGAAAATTTCCCACGGGAATGTTACAAAGCCAGTTGGAGTCCTTGAA GTTGAAACTGCTCCACAAAAGAAAATTTTTGAGTTAAAGAAGCATGTGCCGCCACAATCTGCTGGATTTGAGGATGAGGATTCAAGATTTAATGTAACAA GTACTCCACCGGTCATCAATGAACCTACTGTGGTCCGGTCTAGTCGTTTGCATCAAGCATATGTTCCAGATGATCATAGCTTCCACAACGGTAAGGACAG CGATGAGTTTCTCAGAGAATCCTCTCCTGGGTTTGATGTTCTTGTAGATGATGAACTTAGGAATTCTGATTACTATCACGGGGAAGATGACTTTGGAAAT ACAAGAGGTCAAGATGAAAGGAACTTGGACTCTTTGAATGAGTATGATCTAGGACATTCTGCTGATTATAGTTTAGCAGCTGATATTGACAGAGATAGAT TTCGTGTGCCCCAAGGTTATGACTCATATGATCATACACAAGAGACATACATGTGGGAACAACACAGAAAGCCATCAGCCAATTTAGAAAGAAGGCCTCA GCGCAGATCTGACAGTCCTAACAATGCTGAGGTCTCAGATCTCAGACTTCATATATCCAAGCGCAGGAAGGGTAATGGTTTGAAATCTGTTGTCGCACAT GATTATGCTCATGAAAGACGTGACAAGGAACGCAGTCACCGGTATATTCCCAGGATGGATTCACTCCAGTTACCTTCGAATGAGAGTTCCATTAGTAATC GTTTCCGGGGAAGAATTAAACTTCCAGTAAATGGTGGTGATGTTCACCAAGAGAGGGAATCAGACAGAGGAAGAATTGGGAGCAGATTGTCATCTGGAAG GTTACCAGCCCCTCATCAAGGAAGGTTTCAAGATAGAATTAGAGGAAGGGTGCAAGATGTTGAGAGGGGGAACTTGAGGCAATCATTGCAGGGGAGAGAG GGGGACAGAACCAATGATTTTTATGCGCCAAAACGTCTTTCCGAACTTAAAAATGGGAGGAGCAGTGAGAATAGGGAGCAACTCTTTCTGGGAAAGAGAA AAGGTTTAAGGGACCACCAACAATCTGATGATGATTTTCAGTTTGAAGGTCCAAAACCTCTTAGTGAAATTCTGAAGGAGAAGAGAGGAGTTGGAGCTGG TGCAGCCCCCCAAAGTGGCAATTCATCTGAGAATAAAAATATTGAAATTACCAATAACTCAGATCATACATCTCTCACAAACACACAAAATGGAGCATTG TTAGAGACCATGAAGAATGTCAACAATCATGAAGAAGTATCAAAGTCTCAGGTCACTAATGCAGTTGGAAAAAATGCAGATGATGCTGAGGCAAGTCATG GTCAATCATCTGTAGAAGGACTGATCCATGATGAAGCCGCGGAGGATCAGAAATATGAAGGTGATGATCAAGTTTATGGAGAATATGATTATGATCAAGT TGATGAGGGGGACTATGAGTATGAGCAAGTTGATGAGGGTGAAAATCCAGAGCAAGAATACATGGATGAAGAAGAAGATGGGGATGACTTTGCTAAGAAG ATTGGTGTCATCGTTACATAATTATTATGGACAAAAAAGCTCTCAGACATAGATAGAACATCTTCTGCTCTTTGATATGAATACCTTATCTTGGTTTCTC TGACTATGCAGCATTCTGCTTAAATTTTGCTTGCAGAACTGGGGTGGTATCATTATCAGTTTCTTTTCTTGTATTAATCAGTTAATCCTTTTTCGTTTTA CTGTGTTTTTGAATCAGATTGAGTGGATATTTTTGCTGTCAATGCAGATGCAAGCCTTGTAACGTTAGAAAGTTAATAATAATATTAGCATTCACTCTAC ACTTTTCAATTGACTTGACTTTTACATACCTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_43110; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_237866
| Blastp | Zinc finger CCCH domain-containing protein 17 from Arabidopsis with 39.26% of identity |
|---|---|
| Blastx | Zinc finger CCCH domain-containing protein 17 from Arabidopsis with 37.99% of identity |
| Eggnog | chromosome 12 open reading frame 50(ENOG41101ZI) |
| Kegg | Link to kegg annotations (AT2G02160) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464077.1) |
| Pfam | RNA-binding, Nab2-type zinc finger (PF14608.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |