| Id Trinity | FTRINITY_DN54499_c0_g1_i15 |
|---|---|
| Name Transcript | Ll_transcript_237602 |
| Sequence | GAAAAGGAGCAGTGTTATATACACCCTAAAAACTAACACTTAAAAATTGAATTTTTATATATATGTTTGAGTGGCACGTTACAAGTTGATCAAAACAAGG ACCCTTTCACTTTCACCCTTTCTATTATCTTCTCTTCGCTGTTACTTCTTCTACTTCTTCTTCTTCTTCTTCTTTACCCCAAAACCCATCGATCAACCCT TGTTATAGGTTCCTCGATGCATCACATTTATTAACAATCATCATCCTTTTTCATTACCCAATTCGATTTTGTTTTTCATTCACACGATGAAGAAACGCCC AATAACAAGCGTCGACGTCGCTGTTGTTGATATCTGGAATCGAGAACTTGGTCAACTTTCCTCTAGAAATTTCGCTCATCGTCTTTCTGCCTCTCAGGAT CTCGTCCTTCGACTTGATATACTCAGGAAGCTTGAAAAGCACAGGGGTTGTGTAAATACTGTGAGTTTCAATGAAGATGGTGACATTTTGGTCACTGGTT CTGATGATAGGAAGGTTATTCTCTGGGATTGGGAAAATGGGCATACTAAGCTCTCTTTCCATTCCGGTCACACCAACAACGTTTTTCAAGCTAAGATCAT GCCACACTCTGATGATCGAAGCATCGTCACCTGTGCTGCTGAGGGTCAGGTGAGACAAGCTCAAATTCTTGAAAATGGAGGTGTGGAAACTAAGTTATTG GGAAAGCATGAAGGGCGTGCTCATAAGTTGGCTATTGAGCCTGGTAGCCCTCATATATTTTATACTTGTGGTGAAGATGGATTAGTGCAGCATTTTGATC TGAGAACTGGGGCTGCTACAAGGCTTTTCACATGCCAACCAATTAAGGATAGATGGGATTTCAGACCAGTCATCCATCTTAATGCAATTACAATTGATCC AAGGAACCCAAATCTCTTTGCGGTTGCTGGCGATGATGAGTATGCTCGACTTTATGATATTCGTAAGTATAAGTGGGATGGATCAAATGAATTCGGTCAA CCGACTGACTTCTTCTGCCCTCCACACTTGGTTGGTGATGACCGAGTTGGAATAACAGGGTTGGCATTTTCTGAACAAAGAGAGCTGCTTCTATCATACA ATGATGAGTTTATTTACCTTTTTACACAAGATATGGGTTTGGGACCTAACCCTCATCCTGGATCCCCTGTATCCCCTGTATCCATGAACAGTGATGCGAG CGAAATAGGGGTTAGTCATGGCTCTGAAGCATCTCCATCACACATAGAAAGTGATGACAAAACCATTCCACAAGTTTTTAAGGGACATAGGAACTGTGAG ACAGTGAAGGGGGTTAACTTTTTTGGGCCAAAATGTGAGTATGTGGTGAGTGGATCAGACTGTGGCCGAATTTTTATATGGAGAAAAAAAGATGGACAGC TTATTCGGGTTATGGAAGCAGATAAGCATGTAGTTAACTGCATTGAGTCTCATCCACATACTATAGTTCTTGCAAGCAGTGGAATTGAGCATGACATAAA GATATGGACTCCAAAGGCACTCCAGAAAGCTATTTTGCCTAAAAATATTGAGCAGGTATGAACTCTGTCTTCTTGAGGTTAATATTATAAGTCAGAAGCA TAAGTTGGTGTTATTGTACTTGGCATTGTGGATGATAACTTTTATGTGTAGGAGACTCTAGATTTTGTTTATTAACTCTTATATGATCATTTATTTAAAC ATAACCAAAATAAATAATATGAAGTTGTTCAAAACATTTTTTTTGGTTTACAAGTTCAAAGCTTCGTTAGCCCTCTTTCCTTTTTCTGCCCTGGGTTGGC CCTCAATCTCAACCCATCCACAAACCTAAATACCTGATGTTACCCATTCCATAAATGGGAATTATGGGATAACCCTTATCTACGGATTATTATTTACTTG ATACCTATGAGTTCTTTGTGAATCTTCCTTTGCCCAAAGTTGATTTAATTATGTAAAGGTGGACAGGCTTGTGCATTACAATGTTTATTCAATATTTACT TAATTGCTTGCAAAAGTGGCATTTAATAATTTTGTATGAGAAGAGAAATATGTTTTAGCAGAGTGATATAGATATTCACAAAGGGTGGTTTCTTGAAAGG TATGGTGGTAGTTAGCTGAGATAACTCTATTATGGTGTACTAAGCATCATATGAAATCATAGGAATGGTTGAAATTTGACCTATGAGAGAATGTCTCTTA TGTGATTATATTTTCCTAATTAGTCGTGGTTGGAGAAGGGGAGCCTGAGCGTAATTATTGGTATTTTTGCCATGTGACATGGAGGTTGCATGTTCAGGTC ATGGAACCAGCCTCTTGCAAATGCAACATAAGGCTGCGTAGTGCGTACTATAGACCCACATAGTGCGTCCCACCATCCTTAGACACTGCGTAAGGCGGTT TTTACAGCACCAAGTTGCCATTTTGGTTTTGTGGTTGGAGCTCATGATTTTGGTAATAATCTAGCAAAATATATACTTTAACATTATCATTCAAATCCTT AACTTTATGGGTGGATTAGGAGTAGAACCATTTTTCACACATTATGAAGATTGGTAATGTTAATTGATAAATCATAAAAAGGATGGTATAAATGTTCCAT GAACTGTTTGAGCAGCAGAGGAACTAATTTCTCTGCTGTTACTTATTTGAAGAAGGGTCTCATGTTTGATCAAATTCGTTGGTATGATGATGATGACGAC GATGACGATTATGATGATGATTTGTTTGAAAATGAATATGATATGTTTGGTGATGATGATGATGATAACGACGATGATGATACTGATGATGATGATGATG ATGAAACTGACGATTGTGATGATTGTGATGACGAAACTGACGATGATGACAACAATGGCGGTGGTGATGATGATAACACTGATGACAATGGCAACAATGA TAATTTTGGTGGTGGTTGTAATGATGCAAATTGTTGATAATTTTGTTTGTCCAACAGAAACCCAGGGCTCGGGGCTGGATGTACAGCCCGATTGCTACTC CTCAAGATCTGATGTTGCAACTGTTTTCACTTCCAAGAAGGAGGTTTAGGACAGAAAGCAATGGAGAAAACTCCGCTGCAGATAGAGAACTTCTGGAATT GATATTGACATTCAATGCTAACAGTGACAGTTCTAATGATGATGATGATGATGATGATGATGATGATGAAGAGGAGGAGGACGATGATGAAGATGATGAA GAGGACGATGATGATGACAATGAGGATGACGACAATGCAAATGATGATGTCGCAAAAATGATTAGGCAAAGAAAATTTTTACGTGCGAAATTTGGCGAAG GTGGTGATGAAAGTCACGATGATGATGAAGATGAAGACGAGGAAGATTATAATAAACTTACTTTCGGTGGGAAAAGGTTCTCTCACGGCGCTGAGAATCG TAATTTTGAGATTCAATCGAGTGATGATGAGGCCCCAAAAGAGGAGGAAGAATTGGCTTTACAAATACAAAGGGAGAAGGCCAGATCTTTAACAATGGAA GACTATGACCTAGGCGATATTAGTGTAGACAAAGATAATGAGAAATTAACTTCGAAGGATGCATCAGGTAAAGATAAGGGAACAATAAAGTCACCAGACA GAGATATAACTTACAAGCTTGAGGACCTGAATGCTTTGTCAAAGGAGGAGCAAATGAACATTCTGTCTAGGTCTGCTCCAGAATTAGTTGGTTGGTTGTC AGAACTAAACGAGGCTCACAAGCAGCTTGAATGCAAAATTAACCCATTTTTGAGCAAGGTTAAAAAGGGAGAAACGGGTATAGAAGGAGGAGTGCAATAT TTTGAGTTGAAGCAGATTCTGTTGCTGTCCTATTGTCAAGCTATAACTTTCTACCTTCTCCTCAAATCTGAAGGGCAGCCAGTCCATGATCATCCTGTCG TAGCTCGCCTCGAAGAGATCAAGTTATTAGTAGACCAGATAAAACAAATAGACTCTAAACTTCCAGTGGAACTTGAGGACATTCTTACCAGAAGTGATGA GTTAGTAGGAGTAGTGAAGCCAGATAATGAGAATGCTCTATCAAAAACCAATTCTTTTACTAAAAACCAAGAGCAGCCTCTTGTCTCTGATGGATCACCT GATGAAGCAGTGCCTCACAAGTTAGTTGAGATACAAAAATTGGAATCTTCAAAGGATAATGCACAGAAAGCAAGAAAAGATAAACATCAGAAGGATAGCG TTAGCGTGCAGAGTTTGGAAATGTTAAAAGTTAGAGCTTCCCTTGAGGAAAAGCTTAAACAAAAGGGTTTGTACAGTTCGATCACTCCAAAGCCTAGTAG CACCCGAAAACGTTCAAGACCAGTTAATGGACAGCTGGAAACATTTGATGATTTTGATGATGATGCTGCTGATGTTAAGGGGGCAGTTAGATTGGTTAAT GGTTCCAGTAAAGTATCCCAGATTCTTAATGCTAATTTGAAGAAACCAAAGGTACTGAACTTGAGATTTTTGTAAGAGTGATTCTAATTTCATTCGTAAT TCATAGTAACCTGCATACTGCAAGGTATTTGAGTAAAAGTTTCATTGCAAGGTTTACCTATTCCTGGCAGAAAATAATTAAGTTATAGATGCAATCTGAG CAGGATAAAATTGGTGCAGAAAGTCCTGCTTGCAAGTATATGTGTTCGTTATACTTTTAATAGATCCTGCAGCAAGTCTCGGGATGGCTCTCTTATAGTG AAATGTTTTAGTATATTTACATTATCATTATATTACAATAGTGTTATACTAATAAATACAGAGGATATAATATAACATGAGGTGAACCACTGCATTGATC TTTGACCCAGGCTACTGGTTTGTTTATTTTTAACATTGTATTGCATCTACATTCTTGTGCTATTCATGATCCCAGGAAGAAGAAAAATCCATTTTTAGGC TTCAGAAATGTTCATTTTGATATCACCTGCTTAGTATAGAACATCTCATTGCTCTTTTTGTTATTTTGGTGGTAAGGTGATTTCTGGTGATGATGATTTA CCTAAAAGAGATGATATTGGAGAAAGACGAAGGAAACATGAGCTTCAGGTGTTGGCTGGTGCTGGAGTCAAGAATGAAGATGATGACGGTGGTGATGATG ATAATGAAATGAATGATGTAGGATCTGACGAGGTTTCCGATGAAGAGGATGATGTTGAAAATGAGGACTCAGAAAATGAATTTTACAAACAAGTGGAACA ACAGCGAGCTGAAAAACTGGCTGCAAAAGCTGCTAGTTATTCAAGGAATCCTGCTGCACCCTTCTCTCAGCCGGAGACTGTTGAAGGAAAACGTTATATC TCTACTCAGATGTTGAAGAACAGGGGACTGACTCGAAGTCGCAATAAGGATAAAAAGAATCCGAGAAAGAATTACAAGCTCAAGCACCAAAAAGCTGTTA AGAATCGCAAGGGGCAAGTTCAGAGTATCAGAAAGCCAACGGCTCCTTATGGCGGAGAGTTATCTGGAATTAATACAAATGTCAGTAGAAGCATCAGATT CAAGGGCTGATACTATCATGTGGCCTTTCAATATCACCTTTCTAAATTCCCCAATTTTGAATAATTCTCTTGTAATGGTGGAAATGTAACTTATTTGATT GTTGATTAGGGAGATACACACATAGCATCATGGATTTTTGCAATTTTGGTTGTTCTGATCTGAAAGATTATGTTACATTTTATGTTATAGAACTTTGAAG TGGTCTGAAGGTAATACAGTCTGAACATCACTGTAACAAATACTTTCAGCTCTTAAGATGTTATGTTTTAGGATGGATAGATTTGTGTGATACAAGGTGT TGAAATATGGCATGTTTAAGCGTTTATTGTAACAACTTTTAAAATAAGCCTAAAAGATTTAAGTTGCTTTGTAATATTTATTAAAGTAAATTATAATTAG CTTATACGAACGTGATATGCACTTCAATTGCCTTCCAGTACTAAGCAACTACTCCTGGATGTGCTAAATAGGAAACAAGTAGTTTGTACGGAAAACCCTC CAATTATATACGCACGATTACCTTTGTTATATGATTAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_43189; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_237602
| Blastp | Something about silencing protein 10 from Rattus with 33.07% of identity |
|---|---|
| Blastx | DDB1- and CUL4-associated factor 8 from Mus with 42.22% of identity |
| Eggnog | UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)(ENOG410XSPX) |
| Kegg | Link to kegg annotations (305258) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427956.1) |
| Pfam | Sas10/Utp3/C1D family (PF04000.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |