| Id Trinity | FTRINITY_DN54499_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_237578 |
| Sequence | TTTCTGCCTCTCAGGTTTTCTTATCCCTTTTCCTTTATTCACATCATATACACCATTATTTTTTAACATTTAATTTCCACTCTATTGTTTAGGGTTTTTT AATCAACTTTTAGGGTAAATTGGATTTTATATCCTCTTACAAAATTATTTATCAAAAGATTTAATAATTAGGCTTGAGCAGTTTTATGTTGACATGGATT TGAATATGTCGTTCTAGAAATATTAAGTTATAATCTGGGAAAATAGATCAATGCTTTACTCTAATTTATTTTGTAATTTTAATTTTTAGGATCTCGTCCT TCGACTTGATATACTCAGGAAGCTTGAAAAGCACAGGGGTTGTGTAAATACTGTGAGTTTCAATGAAGATGGTGACATTTTGGTCACTGGTTCTGATGAT AGGAAGGTTATTCTCTGGGATTGGGAAAATGGGCATACTAAGCTCTCTTTCCATTCCGGTCACACCAACAACGTTTTTCAAGCTAAGATCATGCCACACT CTGATGATCGAAGCATCGTCACCTGTGCTGCTGAGGGTCAGGTGAGACAAGCTCAAATTCTTGAAAATGGAGGTGTGGAAACTAAGTTATTGGGAAAGCA TGAAGGGCGTGCTCATAAGTTGGCTATTGAGCCTGGTAGCCCTCATATATTTTATACTTGTGGTGAAGATGGATTAGTGCAGCATTTTGATCTGAGAACT GGGGCTGCTACAAGGCTTTTCACATGCCAACCAATTAAGGATAGATGGGATTTCAGACCAGTCATCCATCTTAATGCAATTACAATTGATCCAAGGAACC CAAATCTCTTTGCGGTTGCTGGCGATGATGAGTATGCTCGACTTTATGATATTCGTAAGTATAAGTGGGATGGATCAAATGAATTCGGTCAACCGACTGA CTTCTTCTGCCCTCCACACTTGGTTGGTGATGACCGAGTTGGAATAACAGGGTTGGCATTTTCTGAACAAAGAGAGCTGCTTCTATCATACAATGATGAG TTTATTTACCTTTTTACACAAGATATGGGTTTGGGACCTAACCCTCATCCTGGATCCCCTGTATCCCCTGTATCCATGAACAGTGATGCGAGCGAAATAG GGGTTAGTCATGGCTCTGAAGCATCTCCATCACACATAGAAAGTGATGACAAAACCATTCCACAAGTTTTTAAGGGACATAGGAACTGTGAGACAGTGAA GGGGGTTAACTTTTTTGGGCCAAAATGTGAGTATGTGGTGAGTGGATCAGACTGTGGCCGAATTTTTATATGGAGAAAAAAAGATGGACAGCTTATTCGG GTTATGGAAGCAGATAAGCATGTAGTTAACTGCATTGAGTCTCATCCACATACTATAGTTCTTGCAAGCAGTGGAATTGAGCATGACATAAAGATATGGA CTCCAAAGGCACTCCAGAAAGCTATTTTGCCTAAAAATATTGAGCAGGTATGAACTCTGTCTTCTTGAGGTTAATATTATAAGTCAGAAGCATAAGTTGG TGTTATTGTACTTGGCATTGTGGATGATAACTTTTATGTGTAGGAGACTCTAGATTTTGTTTATTAACTCTTATATGATCATTTATTTAAACATAACCAA AATAAATAATATGAAGTTGTTCAAAACATTTTTTTTGGTTTACAAGTTCAAAGCTTCGTTAGCCCTCTTTCCTTTTTCTGCCCTGGGTTGGCCCTCAATC TCAACCCATCCACAAACCTAAATACCTGATGTTACCCATTCCATAAATGGGAATTATGGGATAACCCTTATCTACGGATTATTATTTACTTGATACCTAT GAGTTCTTTGTGAATCTTCCTTTGCCCAAAGTTGATTTAATTATGTAAAGGTGGACAGGCTTGTGCATTACAATGTTTATTCAATATTTACTTAATTGCT TGCAAAAGTGGCATTTAATAATTTTGTATGAGAAGAGAAATATGTTTTAGCAGAGTGATATAGATATTCACAAAGGGTGGTTTCTTGAAAGGTATGGTGG TAGTTAGCTGAGATAACTCTATTATGGTGTACTAAGCATCATATGAAATCATAGGAATGGTTGAAATTTGACCTATGAGAGAATGTCTCTTATGTGATTA TATTTTCCTAATTAGTCGTGGTTGGAGAAGGGGAGCCTGAGCGTAATTATTGGTATTTTTGCCATGTGACATGGAGGTTGCATGTTCAGGTCATGGAACC AGCCTCTTGCAAATGCAACATAAGGCTGCGTAGTGCGTACTATAGACCCACATAGTGCGTCCCACCATCCTTAGACACTGCGTAAGGCGGTTTTTACAGC ACCAAGTTGCCATTTTGGTTTTGTGGTTGGAGCTCATGATTTTGGTAATAATCTAGCAAAATATATACTTTAACATTATCATTCAAATCCTTAACTTTAT GGGTGGATTAGGAGTAGAACCATTTTTCACACATTATGAAGATTGGTAATGTTAATTGATAAATCATAAAAAGGATGGTATAAATGTTCCATGAACTGTT TGAGCAGCAGAGGAACTAATTTCTCTGCTGTTACTTATTTGAAGAAGGGTCTCATGTTTGATCAAATTCGTTGGTATGATGATGATGACGACGATGACGA TTATGATGATGATTTGTTTGAAAATGAATATGATATGTTTGGTGATGATGATGATGATAACGACGATGATGATACTGATGATGATGATGATGATGAAACT GACGATTGTGATGATTGTGATGACGAAACTGACGATGATGACAACAATGGCGGTGGTGATGATGATAACACTGATGACAATGGCAACAATGATAATTTTG GTGGTGGTTGTAATGATGCAAATTGTTGATAATTTTGTTTGTCCAACAGAAACCCAGGGCTCGGGGCTGGATGTACAGCCCGATTGCTACTCCTCAAGAT CTGATGTTGCAACTGTTTTCACTTCCAAGAAGGAGGTTTAGGACAGAAAGCAATGGAGAAAACTCCGCTGCAGATAGAGAACTTCTGGAATTGATATTGA CATTCAATGCTAACAGTGACAGTTCTAATGATGATGATGATGATGATGATGTTGATGGAGACACGGTCAGTCATGAGGACTTGTTCAGCTGAGTTACACA GTCAAAAACTTGTCCCTTCCAAATGAATGGTAGCAATTGTATATAACAGGTTTAACAATAACTGTTGAGTGGAATCTAAACATGATTCTGTATACAATTG CCCTTGAAATTTTCTTTGTGGTGGAAATAATTAATGATTTTTGTTTATTCTTCGCATAGGTTGAATTATATGTGATCTGATGAAGTAAATTGATTATATG GTAAGTTATTTGTAGAAACTGAGAATGGTGAATCACTATTAGATGATGGAAATGAGTTTCATACAAAATTATAGCTAGGAATGGGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_43189; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_237578
| Blastp | DDB1- and CUL4-associated factor 8 from Mus with 41.35% of identity |
|---|---|
| Blastx | DDB1- and CUL4-associated factor 8 from Mus with 43.12% of identity |
| Eggnog | ddb1 and cul4 associated factor(ENOG410XQZP) |
| Kegg | Link to kegg annotations (98193) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427956.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |