Id Trinity | FTRINITY_DN54505_c4_g3_i15 |
---|---|
Name Transcript | Ll_transcript_18459 |
Sequence | CTCCTCTAAAACCCAACTCGCAAACAGACCCTTAGTTGGGTTCTGTTTTACACTGTCATTGTTTTCAATGCTAATCTCGCCTCTTAAATATTATTATAGG TCTGGATCAGTTTACTGGAGGGGTTTCTTTGTTACCAACAATCCTTATGCTTTTAGAGTATGGACTTGCAATTGCATCATCAACTTATTGCCTTACATTT TTCTTTTATGACCATACCATGGCTCAGAATGTGGTTCTCCTGGTCCACTTTTTCACTGGATTGATACTAATGGTTATCTCATTCATTATGGGACTCATAC CATCCACAATAAGTGCAAATTCTCTTCTTAAGAATTTTTTCAGAATATCTCCTGGATTTTGTTTTGCTGATGGTCTTGCTTCATTAGCTCTTCTGCGACA AGGAATGAAGGATAAAACAAGTGATGGGGTGTTTGATTGGAATGTTACCGGTGCTGCCATTTGTTATCTTGCTGTTGAGAGCTTTATTTACTTTTTGTTG ACACTTGTGCTTGAAATTTTTCCTGCTCTTAAATTCACTCCATTCATGATCAAGAAATGGTGGGAGAATATTAATATCTTCCAGCATAATACTACATATT TGGAACCTCTACTAGAACCTTCCTCTGGAAATGTGGATAAGGACCTTGATGAAGATGTAGACGTGAAAACAGAAAGAAATAGAGTACTTTCAGGTTCCGT TGATAATTCCATTATCTACTTGCGTAATCTTCGTAAGGTGTATTCTGAAGAGAAGTATCATGAGAAGAAGGTTGCAGTAGATTCATTAACCTTCTCAGTT CAGGAAGGAGAATGTTTTGGCTTTTTAGGAACAAATGGGGCTGGAAAGACTACAACCCTTTCTATGCTATGTGGGGAAGAATCTCCTTCTGATGGGACTG CTTTTATTTTTGGGAAAGATATATGCTCCAATCCCAAGGCTGCTCGCCGATATATTGGGTATTGTCCACAATTTGATGCTCTGTTGGAATATTTAACTGT CAAAGAGCATCTTGAGCTTTATGCTAGAATAAAAGGTGTTCCAGATTGCACAATAGACAATGTTGTTATGGAAAAGTTGCTGGAGTTTGACTTAGTGAAG CACGCTAATAAACCATCTTTTTCACTTAGTGGAGGGAATAAAAGGAAACTGTCTGTTGCAATTGCAATGATTGGAGATCCTCCTATTGTAATTCTTGATG AGCCATCCACAGGTATGGATCCTATTGCCAAAAGGTTCATGTGGGATGTAATATCTAGGATCTCAACAAGACGAGGAAAGACTGCAGTAATTCTTACTAC TCACAGCATGAATGAAGCTCAAGCCTTATGTACCAGAATAGGGATAATGGTGGGTGGACGACTAAGATGCATTGGAAGCCCACAGCATCTGAAAACAAGA TTTGGGAATCATCTTGAACTAGAGGTAAAACCTACTGAAGTGAGTTCTGTGGACTTACATGCGCTCTGCCAAGCTATACAGGAAAGACTTTTTGATGTCC CTTCTTATCCTAGAACCTTACTTAATGACCTTGAAATTTGCATCGGGGGCACAGACTCCATTACCTCAGAAGACACCTCTATTGCGGAGATTAGCTTGAC ACGAGAAATGATAGCCTTAATTGGGCTTTGGCTTGACAACGAAGAAAGAATAAAGACACTAATCTCTTGTACACCTGTCTCTGATGGAGCTTCTCAGGAA CAGTTATCAGAACAATTATTTCGAGATGGTGGCATTCCATTGCCAGTATT BLAST |
Tissue | flowers |
Gene name | LI_gene_43269; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_18459
Blastp | ABC transporter A family member 1 from Arabidopsis with 72.95% of identity |
---|---|
Blastx | ABC transporter A family member 1 from Arabidopsis with 72.46% of identity |
Eggnog | (ABC) transporter(COG1131) |
Kegg | Link to kegg annotations (AT2G41700) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019444052.1) |
Pfam | ABC-2 family transporter protein (PF12698.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |