| Id Trinity | FTRINITY_DN54505_c4_g3_i2 |
|---|---|
| Name Transcript | Ll_transcript_18438 |
| Sequence | CAAAATATTTGTGTAAAGGGACAAGGCTCCTCTAAAGTGGGTTTGGTTGTAAGGTGAGAAATTAAGAGTGTATCTTCCCTTGATTACTTAAAGTGTATTA AGATCTCAACATACTAAATGATCCAAGGGTGGATGCAACCTCACTTTGTCACTTTACACTCAAGTTTGTGCTAGGCGTGTGAGCTGTGTTTCAAGTATTG AAGTCCCACGTTGGTTGAATTCATGAGAGAAGAATGATTTGTAATAACCTGGGCATCCCTTCCTTTGTGAACAAACATTTGCCCAAATTATTCTAACAAG ATCCATTCATCAACTTAAGAGGGAGTCTTGAAATGTCTACATTAAATTATAATGTTGTAATTTTTGTAGATTTTACAATTATTATGGTAGACTATAACTT ACCTTATTTTTTGTTCCTATTTTTAGGTAAATAGTTATTTCTCTTTAGTCTATATACTGTAAATCCTTGTAACGGGTTGTTCATTTAGTCATAATAATAT TCAGACTTTTCCATTCAAGTCTATACATTTCTTCTCTCCCCTTATTTTGTAATTATTTTCTGACAGCTCTCTTTTCCTGAAGCATCATTATGGAGTTGGT TATACTTTAACTCTTGTGAAGTCAGCTCCTACTGCTTCTATAGCTGGTGATATAGTATACCGTCATGTTCCATCAGCGACCTGTGTAAGCGAGGTGGGAA CTGAGATTTCCTTCAGGCTTCCTCTGGCGTCCTCGCCAGCCTTTGAGGGGATGTTTAGAGAAATTGAACGTTCTATGAAAAAATCAGGTTCAAACGTGGG ATTGAGTGGTAGTAGTGACAATGACAGTCTTGGTATAGAAAGCTATGGTATATCTGTCACAACCCTGGAGGAGGTATTCTTGAGAGTTGCAGGATGTGAT TATAATGAAGCTGAATGTCTGGAGGAAAATAATCATTCCCTTCTATCAGACTCAGTGGCTTCTCTTGCTTCTTATGATCGTCCATCAAAAACCATATGTT ATCCTGAAGTTTTTGGAAATTATAAGATCTTTGGTTTCTTAGCTTGCATGGTGGGAAGAGTTTGTGGTTTAATTTTTGCTATGCTCATAAGTTTCATCAA CTTCTTGGGCATGCAGTGTTGTAGCTGTGGTATCATTACTAGGTCAACATTTTGGCAACATTCTAAAGCTTTATTTATTAAGAAGGCCATAACTGCTCGG AGAGATACCAAAACAATTATTTTCCAGCTAATGATTCCTGCTGTCTTCTTGTTTTTTGGTCTACTATTTCTCAAGCTCAAGCCACATCCTGATCAGCAGG GACTGACCCTATCAACTTCTTACTTTAATCCTCTTTTGAGCGGTGGGGGTGGAGGGTGTCCAATTCCTTTCAATCTATCTTTGCCAATTGCTGAAAAGGT TGCACAAAATGTTGAAGGGGGATGGATTCAAAGGTTCAAGCCAAGCTCATACAAATTCCCAAATTCAGAAAGTGCATTAGCTGATGCGGTGGAAGCAGCA GGGCCAACCCTAGGACCCGCTCTAATTTCAATGAGTGAATATTTGATGTCTAGCTTTAATGAATCCTACCAATCTAGATACGGGGCCATTGTGATGGATG ATCAGAATAATGATGGAAGCTTAGGCTACACTGTATTACACAACTTTTCTTGTCAACATGCTGCTCCAGCCTTTATCAATTTGATGAATGCTGCAATTCT TAGGCTTGCTACTCATGACGTCAATATGACAATTCAGACACGCAACCACCCTCTACCAATGACACAAAGCCAGCGTGTACAACGACATGATCTGGATGCC TTCTCTGCTGCGATTATTGTCAATATTGCATTCTCTTTTATTCCCGCTTCATTTGCTGTTTCCATTGTTAAGGAACGTGAAGTGAAAGCTAAGCACCAAC AATTAATCAGCGGGGTTTCTGTCCTTTCGTATTGGACTTCTACATTTATCTGGGACTTTTTGAGCTTCCTGTTTCCGGCCACTTTTTCCATAGTTCTCTT TTACATATTTGGTCTGGATCAGTTTACTGGAGGGGTTTCTTTGTTACCAACAATCCTTATGCTTTTAGAGTATGGACTTGCAATTGCATCATCAACTTAT TGCCTTACATTTTTCTTTTATGACCATACCATGGCTCAGAATGTGGTTCTCCTGGTCCACTTTTTCACTGGATTGATACTAATGGTTATCTCATTCATTA TGGGACTCATACCATCCACAATAAGTGCAAATTCTCTTCTTAAGAATTTTTTCAGAATATCTCCTGGATTTTGTTTTGCTGATGGTCTTGCTTCATTAGC TCTTCTGCGACAAGGAATGAAGGATAAAACAAGTGATGGGGTGTTTGATTGGAATGTTACCGGTGCTGCCATTTGTTATCTTGCTGTTGAGAGCTTTATT TACTTTTTGTTGACACTTGTGCTTGAAATTTTTCCTGCTCTTAAATTCACTCCATTCATGATCAAGAAATGGTGGGAGAATATTAATATCTTCCAGCATA ATACTACATATTTGGAACCTCTACTAGAACCTTCCTCTGGAAATGTGGATAAGGACCTTGATGAAGATGTAGACGTGAAAACAGAAAGAAATAGAGTACT TTCAGGTTCCGTTGATAATTCCATTATCTACTTGCGTAATCTTCGTAAGGTGTATTCTGAAGAGAAGTATCATGAGAAGAAGGTTGCAGTAGATTCATTA ACCTTCTCAGTTCAGGAAGGAGAATGTTTTGGCTTTTTAGGAACAAATGGGGCTGGAAAGACTACAACCCTTTCTATGCTATGTGGGGAAGAATCTCCTT CTGATGGGACTGCTTTTATTTTTGGGAAAGATATATGCTCCAATCCCAAGGCTGCTCGCCGATATATTGGGTATTGTCCACAATTTGATGCTCTGTTGGA ATATTTAACTGTCAAAGAGCATCTTGAGCTTTATGCTAGAATAAAAGGTGTTCCAGATTGCACAATAGACAATGTTGTTATGGAAAAGTTGCTGGAGTTT GACTTAGTGAAGCACGCTAATAAACCATCTTTTTCACTTAGTGGAGGGAATAAAAGGAAACTGTCTGTTGCAATTGCAATGATTGGAGATCCTCCTATTG TAATTCTTGATGAGCCATCCACAGGTATGGATCCTATTGCCAAAAGGTTCATGTGGGATGTAATATCTAGGATCTCAACAAGACGAGGAAAGACTGCAGT AATTCTTACTACTCACAGCATGAATGAAGCTCAAGCCTTATGTACCAGAATAGGGATAATGGTGGGTGGACGACTAAGATGCATTGGAAGCCCACAGCAT CTGAAAACAAGATTTGGGAATCATCTTGAACTAGAGGTAAAACCTACTGAAGTGAGTTCTGTGGACTTACATGCGCTCTGCCAAGCTATACAGGAAAGAC TTTTTGATGTCCCTTCTTATCCTAGAACCTTACTTAATGACCTTGAAATTTGCATCGGGGGCACAGACTCCATTACCTCAGAAGACACCTCTATTGCGGA GATTAGCTTGACACGAGAAATGATAGCCTTAATTGGGCTTTGGCTTGACAACGAAGAAAGAATAAAGACACTAATCTCTTGTACACCTGTCTCTGATGGA GCTTCTCAGGAACAGTTATCAGAACAATTATTTCGAGATGGTGGCATTCCATTGCCAGTATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_43269; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_18438
| Blastp | ABC transporter A family member 1 from Arabidopsis with 68.92% of identity |
|---|---|
| Blastx | ABC transporter A family member 1 from Arabidopsis with 69.42% of identity |
| Eggnog | (ABC) transporter(COG1131) |
| Kegg | Link to kegg annotations (AT2G41700) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444052.1) |
| Pfam | ABC-2 family transporter protein (PF12698.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |