| Id Trinity | FTRINITY_DN54522_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_19158 |
| Sequence | TCCAAATCCAATATAGTGCGAGTATCGCGTGAGAGTTCCATTTTGTGCAGTGAAAAAATGGCTGCAGCGCACTGCAACTACCTCTCAACGCTTCCCGCAA CGAATTTGAAATTGTGCTCCGATCATTCTGTTCGTTTGAGTCACACTCTGACACTGAAGAGCCCCAATAGTTCATGGATAGGTACCAAACTTTGCGTCGG TGTTAAACCTCATGTATGGGTTTGCACGCGCCGCCCCTTCTCCGCCATCGTATCCTTCAGTCTCCCCACCGCAAATCCAGAGCGAGTTTCTCCGTCACAG GAACTTCCAAAATGGTCTTCGAAGGCTATAAAATCATTTGCAATGGGTGAATTGGAGGCAAGAAAATTCAAGTATCCAACTACTGGTACCGAAGCTTTTC TCATGGGCCTTCTTATTGAGGGTACTAATCTAGCTTCTAAGTTTTTAAGAGCTCATGGTATTACATTGTTCAAGGTACGGGATGAAACTGTTAAGTTACT TGGAAAAGCGGATATGTTTTTCTTCAGCCCCGAGCACCCTCCACTCACTGAACAAGCTCAGCGTGCCCTTGATTGGGCTATTGATCAAAAAATAAAATCT GGTTTGTTTGTCTTTTTTCTTATTTACTCTAGTATTGTTTCTCTCCTATCATAAATGCTAATTTGCAAATCCTATCTGGCTTGTTCTTGTCATTTTTGTG TGGGTAATTTGGCAGAATTTTGTTTATGGAATGAAGTGTCATGTTGTGTTCGTGTTAAACTAACTAGACATGTTCATCTTAAACTAACTAGACATGGAGC CCAATAAGCCCACATTTGTAAGACCTATATATATATATATATATATTCAAATGTATTATATTTGAGCTTATGTCAACAAGATGTAATTTTATTATGTATT CTATATAAAACATTGCTACTTGAATTGCATAATTTGTGCAAAAATATGTATGTTTGTATGTAATCAGCAATCCTGCTAAATAAAATACATTTGGTTAAAG TTGAGGATGACAGATACTATTTTATCTAAAACCCTGGGTCAGTGGTTTTTTATTGCTCATGATTCTAGTTAGATATTTCTGATTACACAAGTTGTGGTTC ACGAGTATTTGTATTAATCAAGTGTTCTAATGATGTATTGTTTTCTTGTCCTGAAACTTTTCTTTTAGCAAAAATAGTTATCAAATTGTAATGTTAAAGA AGACTCACTTCTGCCTTCGGGAATCATGAGATATGATAAAACTTAACTATGATTCCAACGTAAAATCCTGTGGCAATTAAAATAAAGTGAACGATTTGTT TATAATTGTTTGGTAGAGATTGAAGTGCATTCATTTGTGATTTTCTCAAAAAGCTACAAACGATTCCTGGCATTATGTTTCTTGTCACATATCAGATGGC TTTTGCTTCTTCTTAGAGTAATCCATTGTGATAGTGGGCATTTATAATCTTCTTTTTGCTCTTAAAAGAAATAAAGGTGTTGTTGCATGTGGTGATTGAT TGTTGTGTTGTGGGACAAATTTTTTTTCAATATCTTTAGAAATGCCACTTTCGGGTAGCTTTATATACCCTTTCATAGAAGTCCGTTGCAGTATTTTGTT ATTTACTGCGTTGGTAAATGAATTGTGGTGCATCTAATCCGTTATGCTGCAAATGATAATTCTTATGAAATGTTGCATGCACACAAAGCTAAAAAATTAA TCCATTGTATAAAACTGATTATGATTTGCAGATGATGGCGGGGAAGTTACCAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_43428; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_19158
| Blastp | ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic from Arabidopsis with 56.48% of identity |
|---|---|
| Blastx | ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic from Arabidopsis with 71.2% of identity |
| Eggnog | Clp amino terminal domain(ENOG410YNK7) |
| Kegg | Link to kegg annotations (AT4G12060) |
| CantataDB | Link to cantataDB annotations (CNT0000208) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424432.1) |
| Pfam | Clp amino terminal domain, pathogenicity island component (PF02861.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |