| Id Trinity | FTRINITY_DN54527_c4_g3_i1 |
|---|---|
| Name Transcript | Ll_transcript_18059 |
| Sequence | CCGCCCGCCACCGCATATGTAGAAAAAGAGGGAGAGGGGAAGGAAGAACAACCGTTTGACTTTGGCAGTTGTTGTGGAGCCAGCCGCAATTGCAACACTG GCACCATAACCGAGTTGCATGCCTCAATTTGAATTAGAGGTTACCATTAATCTAGTGCATGACCTCTAACTACTTTCCGTAAACTTCTTTGTCCATTCAT AGTTGTTAGTTGTTACCATCAGCCAACATTATATCTTTCCTTATATTCCTTTCACTTTTCTCTATATAAGAACGTCATTTTTTCCTCAAATATTCATACC AAGTACTGAACTCATGGCAACACAAATTTCACAACACCTAGAGCCATGGCATAATCTCAACGGAAAAGTCGTTATGGTTACCGGTGCTTCTTCCGGCCTC GGCACTGAATTCTGCCTCAACCTCGCTAGAGCTGGTTGTAGGATCATCGCTGCAGCTCGTAGGATTGATCGCCTAAAATCCCTCTGCCAAGAAATCAATC GAACAACGACATTTAATGACGTCAGTGCTGGAAGCCTTCGTGCGGTTGCTGTGGAACTTGACGGCCCAACCATTAACAAGTGTTTGCAGAAGGCGTGGGA TGCGTTTGGCCACATTGATGTGTTGATTAACAATGCTGGTGTTAGAGGAAGTGTCAAATCGTCCTTGGAATTGTCTGAGGAGGAATGGAATCACATGCTC AGAACCAATTTAACTGGAAGGTGGTTTGTATCGAAGTATGTATCCATACGCATGCGTGATGCACAACAAAAAGGAACAATCATCAATATTTCTTCAATTG ATGGTTTGAATAGGGTGAATTCGCATGGAGCTGCTGCATATGCATCTTCAAAGGCAGGTGTCATTATGCTGACAAAGGTAATATTATTTTATTCAGAGAA CAAATTTTATAGGCCCATAGTGTATGATTTTTATACATTATCACACTATCATTTATCATTTATGTTTAATCATCATTGATTCTTCACACAAGTAATACAA AATAACGGTAAATAATATATTGAGTATGTATAAATCTTTAGAGTAATAATGTATAGATATTATATTCTTTCATTCTAAATAATCATACATATGACATAGG GATAAAGAAAGATAAAAAACCATAACACATGTTATTAGATTGTAATTCAAAAAGTTAGTTAGTTAGTTAAGTCTCTTTCTATTGTTAGTAAGTAGTTGGT TGGTAGTTAGTAATCACTACTATAAATAGTAGTCTGTTAATTGCTTTGCTGAATAACATGAAACACTACTCATTCATCTCTTTCTTCTTCTTTCTCTGCT TTTACTCTAACAATTTGGTATCAGAGCTCAGTTTTTCGATCCAAGGGCAAGATGATGAATCTCAATCAAACTGCTACTGCCTTCCCAGCGCATCTGCCAA TTCTCAATGGCAAGAATTGGAATCGGTGGAGTGCTCAAATGAGAGTGATCTTTGGCTATCAATAAGTGTTGGAGATAGTAGAGAACGAATTTGAGCCCAT ACACGGTGAATCCACTGATGCAGAAAAGGAAGAATTTAAGGTGAACAAGAAGATGGATTGCAAAGCATTGTTCTTGATACAACAATGTGTAGATAATGCC TGCTTCAAGAAGATTGCAGGAGCTGCAAATTCCTATGAGGCACAGAAGATCCTGGAAAGATGCAATGAGGGTGCAGAGCAACTAAAGAAGGTGAAGTTGC AAACGTTGAGGCGACAATACGAGCTGATGCAGATGGAGAATTCTGAGAAAATTGGTGTTCTTCAATTGTGTGGTTACAATGACAAATGCAATGAAGGCAC TAGGAGAAACAATGATAGATCAAACCATTGTTGAAAAAATTCTTCGTACCTTAACACCTCGGTTTGATCACATTGTGGTGGCCATAGAAGAATCGAAGAG GCTGGTGAAAGTGCGCATGTCAAGAAGGCACTTTGGAGACCTTTCTTACGTTATGTTTTGATGAGGA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_43495; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_18059
| Blastp | Uncharacterized oxidoreductase SSP1627 from Staphylococcus with 34.83% of identity |
|---|---|
| Blastx | 3-oxoacyl-[acyl-carrier-protein] reductase FabG from Aquifex with 33.9% of identity |
| Eggnog | serine 3-dehydrogenase activity(COG4221) |
| Kegg | Link to kegg annotations (SSP1627) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427170.1) |
| Pfam | short chain dehydrogenase (PF00106.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |