| Id Trinity | FTRINITY_DN54535_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_16737 |
| Sequence | CTTATATTCACGATTCCTCAAAAGTTGGTGTCTGTACTAAGTTTCTGGATAGTTCATAAGGTTGACAGATAAGGTTTTGTTCTGGATAGTTCATAAGGTT CCTCATATGAGTAAGCAACATTATTTGACAATGATCCCTTGGATTTAGAGTTTGATAATCTGAATTAACTTATCCACTAGGTTCTTATAATGAACAATAG TTTTCATTACTTAGGCAAGTGGTGAGAGACTCAAGACAATTGTCAATGAAATAATGCAGGGTTTTCTTTCTTGTATGTTTCATTTCTTTGTTTTATTTTT TAGAGGATGAGACTCAAGTCTTCTTTTTTTTTTTGGACTTTTCTTAGGCAAAAGATTCTTATAATGGACTTTTCTTTCTTCTCTTACCACATAAATTTCA ATCCACTTATATAACAAATCTTATCCAAAGTATAAGAATGCTAGCTACTGAAACAAACTAATAATACCCTCTTATAAATCCTTGGTATTAAAAGCAACCA AAAACTAAAAGTTTCTACAGCTTAGCCTAGGACAAGAATTTAGTCATGGCAACAAGTTGCTCCTACATGGTTTCAACCAAGTTATCCATGTTATGTAATT GGGCAGGAGGAAAAAGAGAATTAGTGAGAAACAAGAGAGCATTTTTCATTTCAGCTCAGCAACAAACAGATATTAAAGAAGCAGATAATGTGCAAGAACA AGTAGAAAGTAGTGAGAAAGTGAAGCCAAAAGGAACACCACTAAGGCCAGTGGAACCACAGTTGAATGTGAAAAGCAAAAACATGGGCAGAGAATATGGA GGGCAGTGGCTAAGTTCTGCCACACGCCATGTTAGGATCTATGCTGCATATATTGACCCAGAGACTTGTGAGTTTGATCAAACTCAGATGGATAAATTGA CCCTTATTCTTGACCCTACTAATGAGTTTGTGTGGAATTCTGAGACCTGTAATCAGGTTTATTCTTACTTCCAAGAGCTTGTAGATCACTATGAGGGTGC TCCACTGACAGAATACACTCTTAGGCTGATTGGGTCAGACATAGAGCACTATATAAGGAAGATGTTATATGATGGGGAAATCAAGTATAACATGAATGCA AAAGTGTTGAATTTCAGCATGGGAAAGCCAAGGATCTTGCTCAACAATGATATCCCAAATGAAGATACACTTGATAAATGATTTATGGTATATATCAACA ACAAACAAATTATCTTGCTTATATATGATTTTGTCCAAATATCAATACAATGGCTAGTTCTTTGGTCAAGGTATATAAATTATAACAATTTCTTGTGCAG CATTATTCTACTACTATCAACTATATTCATCTAAATTTCTTGTTACTCTATTTCCATTTTACTTCACTATATTCCATTAAATTTTGTTACAACCTAAGAT AACTAAACAAAAGTAAACAACTACTGTGTACTATAACAAAAGATGTTCACCGTTGACCCAACTAAAGTAGAGTTTTTAAAAGTGGACTTGTATTTAAAAT GAGAAAATAAGATTGTAATCATAATTTTCTTTGTTTTTTCAGAATATTCTTTCATTCTACCGGGTGAATAATAAGTTGTTCTAAGCAGTGACATTAAAAG TTTTGCAGGGTTTGAGTGTGGGTATTAGCTATAAGTAGTAACATTGTTATTTTTGTTCATAAGTTTTGTCCCCAAATCCAATAGGGTGATTATTTTTACA TTCCAACTTCACAATCCAAGGTGTAAAGATTCTGAGCCCTTTTGTATTTTGAAATTTATGCAGATTCCTCATGTGTGAATAGTGATGAAAAAACAGGCAA AGTAGTGGGCTAAAATTATGGGTTGGACACAATTTTAGTTAGTTTATCAATTTTGCCCGACTCTTTGTCACGGAATCGCAACCGACCCTTAGTTTGAGAA TTGAATTTTGAAAGGAAAGAAAGAAAAAGAGAAGGTTTGGAAGCCATAAAATATGTTTATGAAATAACTCTTAAGTCTTTCATTTTTATTTTGCCCCCTT CAATATTCAACTCCAAATAAATCCTAAATATAAGAAGAGAACCAAAATTGTAAAAAAATTATTGCCTTAAAAATTTTGTGATGTTCAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_43547; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_16737
| Blastp | NAD(P)H-quinone oxidoreductase subunit M, chloroplastic from Vitis with 77.67% of identity |
|---|---|
| Blastx | NAD(P)H-quinone oxidoreductase subunit M, chloroplastic from Vitis with 77.67% of identity |
| Eggnog | electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon- concentration (By similarity)(ENOG4111NC5) |
| Kegg | Link to kegg annotations (100264425) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415947.1) |
| Pfam | Cyanobacterial and plastid NDH-1 subunit M (PF10664.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |