| Id Trinity | FTRINITY_DN54535_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_16738 |
| Sequence | CTTATATTCACGATTCCTCAAAAGTTGGTGTCTGTACTAAGTTTCTGGATAGTTCATAAGGTTGACAGATAAGGTTTTGTTCTGGATAGTTCATAAGGTT CCTCATATGAGTAAGCAACATTATTTGACAATGATCCCTTGGATTTAGAGTTTGATAATCTGAATTAACTTATCCACTAGGTTCTTATAATGAACAATAG TTTTCATTACTTAGGCAAGTGGTGAGAGACTCAAGACAATTGTCAATGAAATAATGCAGGGTTTTCTTTCTTGTATGTTTCATTTCTTTGTTTTATTTTT TAGAGGATGAGACTCAAGTCTTCTTTTTTTTTTTGGACTTTTCTTAGGCAAAAGATTCTTATAATGGACTTTTCTTTCTTCTCTTACCACATAAATTTCA ATCCACTTATATAACAAATCTTATCCAAAGTATAAGAATGCTAGCTACTGAAACAAACTAATAATACCCTCTTATAAATCCTTGGTATTAAAAGCAACCA AAAACTAAAAGTTTCTACAGCTTAGCCTAGGACAAGAATTTAGTCATGGCAACAAGTTGCTCCTACATGGTTTCAACCAAGTTATCCATGTTATGTAATT GGGCAGGAGGAAAAAGAGAATTAGTGAGAAACAAGAGAGCATTTTTCATTTCAGCTCAGCAACAAACAGATATTAAAGAAGCAGATAATGTGCAAGAACA AGTAGAAAGTAGTGAGAAAGTGAAGCCAAAAGGAACACCACTAAGGCCAGTGGAACCACAGTTGAATGTGAAAAGCAAAAACATGGGCAGAGAATATGGA GGGCAGTGGCTAAGTTCTGCCACACGCCATGTTAGGATCTATGCTGCATATATTGACCCAGAGACTTGTGAGTTTGATCAAACTCAGATGGATAAATTGA CCCTTATTCTTGACCCTACTAATGAGTTTGTGTGGAATTCTGAGACCTGTAATCAGGTTTATTCTTACTTCCAAGAGCTTGTAGATCACTATGAGGTACT TTCCTTAAACAAACTACTCAATACTCAATTGCTTTATTTGGGCTTAAAGTATGGATAATGTTATCATGTGTTTAAATTTGACTTTTACTTGTAAGAATGA GATGATAAGTATTTGAATTAGATCATTTGGTCACAGATTTTTTGATATTATATCAGAATTCAACATAATCAAAAACTTAAACCAATTTGATGAAGACATG AAACTTAAAAATGGATGTAAATATATATATGCTGTAAGGATAGACTATAGGCTATGATTGATTTCATTCTAAAAGTTCATGCTCACCAACATGGTTTAAA TGGCAGTGTATAATTGCAATTAAGGTTGTAATCTGTGGTTGTAGTTGCCTTTTGCAACTGCAATTTTTCCACAATTGTTCATAATTATGATAAGTTACTA AAATAGTATAAGTTACTGAGCTAAACTAGAATAGTATAAGTTACTACAAGAGATTGATTCTACTTTGTGTGAAATTAATTTTGCTCAAACTTGTTCTTTA TGGTGAAATAGTAACATTTGATTGTACAAAGCAGGGTGCTCCACTGACAGAATACACTCTTAGGCTGATTGGGTCAGACATAGAGCACTATATAAGGAAG ATGTTATATGATGGGGAAATCAAGTATAACATGAATGCAAAAGTGTTGAATTTCAGCATGGGAAAGCCAAGGATCTTGCTCAACAATGATATCCCAAATG AAGATACACTTGATAAATGATTTATGGTATATATCAACAACAAACAAATTATCTTGCTTATATATGATTTTGTCCAAATATCAATACAATGGCTAGTTCT TTGGTCAAGGTATATAAATTATAACAATTTCTTGTGCAGCATTATTCTACTACTATCAACTATATTCATCTAAATTTCTTGTTACTCTATTTCCATTTTA CTTCACTATATTCCATTAAATTTTGTTACAACCTAAGATAACTAAACAAAAGTAAACAACTACTGTGTACTATAACAAAAGATGTTCACCGTTGACCCAA CTAAAGTAGAGTTTTTAAAAGTGGACTTGTATTTAAAATGAGAAAATAAGATTGTAATCATAATTTTCTTTGTTTTTTCAGAATATTCTTTCATTCTACC GGGTGAATAATAAGTTGTTCTAAGCAGTGACATTAAAAGTTTTGCAGGGTTTGAGTGTGGGTATTAGCTATAAGTAGTAACATTGTTATTTTTGTTCATA AGTTTTGTCCCCAAATCCAATAGGGTGATTATTTTTACATTCCAACTTCACAATCCAAGGTGTAAAGATTCTGAGCCCTTTTGTATTTTGAAATTTATGC AGATTCCTCATGTGTGAATAGTGATGAAAAAACAGGCAAAGTAGTGGGCTAAAATTATGGGTTGGACACAATTTTAGTTAGTTTATCAATTTTGCCCGAC TCTTTGTCACGGAATCGCAACCGACCCTTAGTTTGAGAATTGAATTTTGAAAGGAAAGAAAGAAAAAGAGAAGGTTTGGAAGCCATAAAATATGTTTATG AAATAACTCTTAAGTCTTTCATTTTTATTTTGCCCCCTTCAATATTCAACTCCAAATAAATCCTAAATATAAGAAGAGAACCAAAATTGTAAAAAAATTA TTGCCTTAAAAATTTTGTGATGTTCAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_43547; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_16738
| Blastp | NAD(P)H-quinone oxidoreductase subunit M, chloroplastic from Vitis with 73.68% of identity |
|---|---|
| Blastx | NAD(P)H-quinone oxidoreductase subunit M, chloroplastic from Vitis with 73.68% of identity |
| Eggnog | electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon- concentration (By similarity)(ENOG4111NC5) |
| Kegg | Link to kegg annotations (100264425) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415947.1) |
| Pfam | Cyanobacterial and plastid NDH-1 subunit M (PF10664.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |