Ll_transcript_18990

• Id Trinity: FTRINITY_DN54538_c0_g2_i1
• Name Transcript: Ll_transcript_18990
• Sequence: ATTCTCATCATCCATGTTCCGTGAAGAGTCCAATACTTTTACTAAAAATTATATTAAAATTTGATATCTCATGTCCCAACACCACGTCATGCATTAGGAT TGCATACAAATCAACTTTTGTTTCACACAAAAGTTATGTGAAGGGTTTCATTCCGTTGTTTCTTATAATTAGTTTCTTATATATAAGACATATTTGTCTT TACATCAACTTAACTTAATCCTATAGTTATGTCTTCTCAAGTACGTGATCAACAGTGCCGTAGCTTACACTTTTTCAAGGTTATTCTTGAAAGCAACATT CGAGATGGAGAACTGGTATACATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAATATGCAGAGTGGGTCGATCTTTTTTGGCATAACCTGTAGGAGTATA GTAATATGGGAATGTTTCAGGTTATTAGGTTTTCACATAAATCTAGTTCATAACTATTTTAGTCATACCAAATGAAATAGTAGATATATTAATTAACCCT GTATCGCATTTTTTGTTGTCTATATTTGATTTTTATACAGTATTAGGGAGAAAGTAGTGTTGTTACTATTTTTGTATGTTTTTTAAATTTTGATTTATAG TAATTATTGACAATTGTGGAAAAATGCGGCTGATGAAATCGCTACAATGAAATTGTAGATTTCCAGAACCATGTTTTTGCGGTCACTATTAAGGTTTTGG ATCACAATTTAAAACTTTTCTGCTGTGTTTATGTTGTTAATGTTGAATGTTAATTGAAAGAAGTTTGTGACAGAGGGTGCCAAAAGTTTTTGTGAAGAGA TGCTGGCAAGAAATAACAAATCCAGTTTTTCTAAGGCTTCCAAATGGCACTGAAAGGAGAGTTTATTGGATTAAAAAAGATGGTGATGTTTGGTTTTCCA ATGGTTGGAAAGAATTTGCACAATACTTGTCATTGGAAGTGTCACAGTTTCTGGTGTTTCGATATGAAGGAAAATCTCGATTCCATGTTATCGTATTTGG AAAAAGCGCATTAGAAATAAAGTACCCTATACCAGAAGATGAAGAGGTTAGCAATGACAGTGATTACTCCTTGAAAATTATTGATGATTTTGATATGATT AACTGTAAAAGGCACAAATCTCCAAAACCATTTTCTCAAGCTCCTAAGAAGATGAAAATCAACCCAAAGGAAGAACATGAATACTATTCCAGCCATGCTA AAACTAGGCTTGAGAAGTGGAAATCCCATAATGCAGGTCTTAGTAATGCTAAGAACAATGGGGAAAGTAGCAGAGATCTTGGTGAGAGAATCAATGCTTT CCACAAGCAAGTGAACCAAATTTTCTACTCTGAGAATTGTTGGTTTGCATGTACACTACAGAAAACATACCTACAAAGAGATTTCTTGGCCCTACCAAAA GATTTTGCTAGAACAAATCTGCAGAAGAAGGAAGGAGAAGCTACCCTTTCTTTCATGAAGGATGGTAAGGGCAGAACCTGGGATGTGATGATAAAGCACT ATTCCTGCAATAAACAATCAGCATTTATTAGTGGTTGGATTAATTTTGTGGAGGACAATAATTTGAAAATAGGTGATGTTTGTGTCTTTGTGCTAAACAA GTGCAAGAAACTTTCATTCCAAGTTGTTATTTTTCCTTTTGAAGATGACTCCACCCTTCCCAAATTTGCAGAGCAAAAAGGACTTTCTATCATGCCTTCT TCATGCCTTGAAGTCCCTGAAACTCCCAAAGCTAATATATTAGTGTCATCCATTAATCACTTCACCATCTACATCAAGGACGGTTCATATCTTACGTCAA TACCAATGAGCTTCATGAGGAATTACCATACACTTGGTGGGAAAAAAGCAAAGTTGAGAGTTGGGAAGAGAACATGGGATGTAAAAGTGCAATATTATCA AACTAGAAGCTTTGCTAGATTCACTGATGGTTGGCGTGATTTTGCTAAGGAATGTAACTTGAATGTGGGTGATTCTTGTCGATTTCAGATTATAGATCAG GAGAATTTTGAGCTCAGTGTTTCAATTATGAAACATAACCACTAAATTCTAAGTTTCATTTTATATACTCTTTCCTTGTGTTCTTTGTTAATTATTATGA ATCCTCTTAACTTTTTTTCCTTCACTTTCATATAGACTATTTCAATTAAATTGTTTCCTTAAAATCCCTTTAAGTTATGTTTTCTAATGGGTCAGAGAAG TTGATGTTTTTTCATGAACAGTATATATTCAGTAAGAATTAACCGTATGCATTCATTATTTAATGACTGAAGGATAAATTATTTATATTACAAAAATTGT ATATTGTAGAAGTTGTATTTTTTAATATAGTTTTTTTATTTACTCGGC
• Tissue: flowers
• Gene name: LI_gene_43574;
• Additional information: details;

Expression of Ll_transcript_18990

FPKM

• FPAB: 0.5
• FPNAB: 0.3
• LF1: 0.2
• LF2: 0
• LF3: 0.1
• LF4: 0.2
• UF1: 0.3
• UF2: 0.2
• UF3: 0.2
• UF4: 0

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_18990

• Blastp: B3 domain-containing protein Os03g0620400 from Oryza sativa with 23.46% of identity
• Blastx: B3 domain-containing transcription factor VRN1 from Arabidopsis with 26.52% of identity
• Eggnog: transcription, DNA-dependent(ENOG41104G8)
• Kegg: Link to kegg annotations (4333466)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423704.1)
• Pfam: B3 DNA binding domain (PF02362.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;