| Id Trinity | FTRINITY_DN54538_c0_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_18999 |
| Sequence | ATTCTCATCATCCATGTTCCGTGAAGAGTCCAATACTTTTACTAAAAATTATATTAAAATTTGATATCTCATGTCCCAACACCACGTCATGCATTAGGAT TGCATACAAATCAACTTTTGTTTCACACAAAAGTTATGTGAAGGGTTTCATTCCGTTGTTTCTTATAATTAGTTTCTTATATATAAGACATATTTGTCTT TACATCAACTTAACTTAATCCTATAGTTATGTCTTCTCAAGTACGTGATCAACAGTGCCGTAGCTTACACTTTTTCAAGGTTATTCTTGAAAGCAACATT CGAGATGGAGAACTGGTATACATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAATATGCAGAGTGGGTCGATCTTTTTTGGCATAACCTGTAGGAGTATA GTAATATGGGAATGTTTCAGGTTATTAGGTTTTCACATAAATCTAGTTCATAACTATTTTAGTCATACCAAATGAAATAGTAGATATATTAATTAACCCT GTATCGCATTTTTTGTTGTCTATATTTGATTTTTATACAGTATTAGGGAGAAAGTAGTGTTGTTACTATTTTTGTATGTTTTTTAAATTTTGATTTATAG TAATTATTGACAATTGTGGAAAAATGCGGCTGATGAAATCGCTACAATGAAATTGTAGATTTCCAGAACCATGTTTTTGCGGTCACTATTAAGGTTTTGG ATCACAATTTAAAACTTTTCTGCTGTGTTTATGTTGTTAATGTTGAATGTTAATTGAAAGAAGTTTGTGACAGAGGGTGCCAAAAGTTTTTGTGAAGAGA TGCTGGCAAGAAATAACAAATCCAGTTTTTCTAAGGCTTCCAAATGGCACTGAAAGGAGAGTTTATTGGATTAAAAAAGATGGTGATGTTTGGTTTTCCA ATGGTTGGAAAGAATTTGCACAATACTTGTCATTGGAAGTGTCACAGTTTCTGGTGTTTCGATATGAAGGAAAATCTCGATTCCATGTTATCGTATTTGG AAAAAGCGCATTAGAAATAAAGTACCCTATACCAGAAGATGAAGAGGTTAGCAATGACAGTGATTACTCCTTGAAAATTATTGATGATTTTGATATGATT AACTGTAAAAGGCACAAATCTCCAAAACCATTTTCTCAAGCTCCTAAGAAGATGAAAATCAACCCAAAGGAAGAACATGAATACTATTCCAGCCATGCTA AAACTAGGCTTGAGAAGTGGAAATCCCATAATGCAGGTCTTAGTAATGCTAAGAACAATGGGGAAAGTAGCAGAGATCTTGGTGAGAGAATCAATGCTTT CCACAAGCAAGTGAACCAAATTTTCTACTCTGAGAATTGTTGGTTTGCATGTACACTACAGAAAACATACCTACAAAGAGATTTCTTGGCCCTACCAAAA GATTTTGCTAGAACAAATCTGCAGAAGAAGGAAGGAGAAGCTACCCTTTCTTTCATGAAGGATGGTAAGGGCAGAACCTGGGATGTGATGATAAAGCACT ATTCCTGCAATAAACAATCAGCATTTATTAGTGGTTGGATTAATTTTGTGGAGGACAATAATTTGAAAATAGGTGATGTTTGTGTCTTTGTGCTAAACAA GTGCAAGAAACTTTCATTCCAAGTTGTTATTTTTCCTTTTGAAGATGACTCCACCCTTCCCAAATTTGCAGGTAATTCCAAATATCAATACATTTCTTTA TAAGAACAGAAAAAATTAGTGAAACAAAAATGCTAATCTTATCATTTTCACATCACTATTCACTAGAGGACATTATGGGGTGACTTTTCTCACTTTTCAT CTTCCAATTTATTCAATATTTCAGâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_43574; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_18999
| Blastp | B3 domain-containing protein At5g18090 from Arabidopsis with 38.95% of identity |
|---|---|
| Blastx | B3 domain-containing transcription factor VRN1 from Arabidopsis with 26.52% of identity |
| Eggnog | B3(ENOG41118R3) |
| Kegg | Link to kegg annotations (AT5G18090) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423704.1) |
| Pfam | B3 DNA binding domain (PF02362.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |