Id Trinity | FTRINITY_DN54538_c0_g2_i5 |
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Name Transcript | Ll_transcript_19004 |
Sequence | TTTAATTAATCTTGACTGTTCTCTGTTCAATGAAGTCACATAGCAAAGATTTATTGTTCTCAGTCTTCAATATAATAAGCATTCTCACTCAAATGTTGTA TATGTATACACACACAAATTGCTTCCACTTGAATCTTTAGAGTTGCTTATCTCTGTTCCAAGTTCTTTAACAGAATATTTTTTCATGGGGAACTACTATG AGAACAGGCCCTACCAAAAGATTTTGCTAGAACAAATCTGCAGAAGAAGGAAGGAGAAGCTACCCTTTCTTTCATGAAGGATGGTAAGGGCAGAACCTGG GATGTGATGATAAAGCACTATTCCTGCAATAAACAATCAGCATTTATTAGTGGTTGGATTAATTTTGTGGAGGACAATAATTTGAAAATAGGTGATGTTT GTGTCTTTGTGCTAAACAAGTGCAAGAAACTTTCATTCCAAGTTGTTATTTTTCCTTTTGAAGATGACTCCACCCTTCCCAAATTTGCAGAGCAAAAAGG ACTTTCTATCATGCCTTCTTCATGCCTTGAAGTCCCTGAAACTCCCAAAGCTAATATATTAGTGTCATCCATTAATCACTTCACCATCTACATCAAGGAC GGTTCATATCTTACGTCAATACCAATGAGCTTCATGAGGAATTACCATACACTTGGTGGGAAAAAAGCAAAGTTGAGAGTTGGGAAGAGAACATGGGATG TAAAAGTGCAATATTATCAAACTAGAAGCTTTGCTAGATTCACTGATGGTTGGCGTGATTTTGCTAAGGAATGTAACTTGAATGTGGGTGATTCTTGTCG ATTTCAGATTATAGATCAGGAGAATTTTGAGCTCAGTGTTTCAATTATGAAACATAACCACTAAATTCTAAGTTTCATTTTATATACTCTTTCCTTGTGT TCTTTGTTAATTATTATGAATCCTCTTAACTTTTTTTCCTTCACTTTCATATAGACTATTTCAATTAAATTGTTTCCTTAAAATCCCTTTAAGTTATGTT TTCTAATGGGTCAGAGAAGTTGATGTTTTTTCATGAACAGTATATATTCAGTAAGAATTAACCGTATGCATTCATTATTTAATGACTGAAGGATAAATTA TTTATATTACAAAAATTGTATATTGTAGAAGTTGTATTTTTTAATATAGTTTTTTTATTTACTCGGC BLAST |
Tissue | flowers |
Gene name | LI_gene_43574; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_19004
Blastp | B3 domain-containing protein Os03g0620400 from Oryza sativa with 23.71% of identity |
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Blastx | B3 domain-containing protein Os03g0620400 from Oryza sativa with 23.14% of identity |
Eggnog | transcription, DNA-dependent(ENOG41104G8) |
Kegg | Link to kegg annotations (4333466) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423704.1) |
Pfam | B3 DNA binding domain (PF02362.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |