| Id Trinity | FTRINITY_DN54543_c3_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_18856 |
| Sequence | ATTAATTGTTTTCATTATCAACAATAAATACTAAACTCCTAGGTGACTCTTCATAGAAATACTTAAGTTTAGAAAAACATGGCACCTAGCTCAATAAATC ATCTCATAAAATCTCATTACCACATATACCCTTTATTTAGAGCGAGGAATACTCTCCATTAAATGGAGATGCAAGTATTACGAACAAACAAATGAAACAA TATTATGATAAAATGTTTTTATCCTTTATATACAATGTAATCATAATTCTTTAATCTATCTACTTGTAAATCCTTTTGCTCTATATTTATTTTCCCTCCC TCCAATTCTTCATGTGTAGCAAATTTCCAAAGAGAATGTCACATTATTGAAGCAGATAAATAGCTATATCTACCTGGTTAGAGGGCCTTAACTTTTCTTT GCTTCTGTGTTCCTTCTCTCACTCTAGCTTCATGCATGGCTTTGTAAGGGGAAGAAGGAGTTGAAAAAAAATGGGAGAAAGTTCTTTGTGTTCAGTGTAG AGTTTGGCATAGAAAGTTGATAATAATTTCAAGTACTTTATAATGCCTGTACCACTTGCTCCTTATCCAACACCACCAGCTCCAGCAGCAAATGGTGCAC AGAGTCAACTTGTTTGTTCTGGTTGTAGAAACCTTCTACTCTATCCTGTTGTAGCCACCTCAGTGTGCTGTTCTGTTTGCAATGTAGTCACAGCAGTGCC ACCTCCAGGCACTGAAATGGCTCAGTTAGTTTGTGGAGGCTGCCATACTTTACTTATGTACATTCGTGGAGCAACAAGTGTGCAATGCTCTTGTTGTCAC ACCATCAATCTAGCTTTGGAAGGTATTCAACTATTAAGGGCTTCATGATCTTAACAACGTTGCATGTATATATGGATGGTGTTATTCTTTAGGTGTTTGG ATGCAGTTTTTCAATTAAAATAGAACATATGTAGTAGCTAACATGTTATATTTTCATTCATGAAATAGTACTCATGTTTTGTTATCATTGGAAAACAGCA AACACATACGGTTTGTTTGAGAGTTGAATTCTGAAAGGGAATGAAGGGAAAATAAAGACTTGAGAGTTATCCCACAAATGTATTTCTTAGCTTTCGAGCC TTCCTTTTCCATTATTTCCCCTCGAAAATCCAACTCACAAATAAGCTCTTAGAGAACAACACAAGTTTTCTATGTCTATAAGTGGAAAGACAATAAGAAT TTAAGACATGTTTAAGGTTATGATTTGAGACCCTACTTTGTTGGTAAGCATCAAATTGCATTGTGATAGCAAACCAGGTGGCACATGTCAATTGTGGGAA CTGCAGAATGCTACTAATGTACCAATATGGAGCAAGATCCGTGAAATGCGCAGTTTGCAATTTTGTAACATCTGTTGGGGCCTCAGCAAGCACCACTGAG CACAAGCTCAGCACCTAAATCATACTATAGCAAAGTCATTGTGGACTCTACAACCATTATTTTGCTAGTTACATATCTTCCATAAGGAATAAAGAGGGAA CTCTCTTCACATTTATGAAGTTATTTTTCCTTTGGGTGATTTTAATCAAACATTTTTATTAGATTTGGTGTATGAATAACTGTTTATGATGATAATCATG ATTCTAATGCTTTAATACTTACATCTTTAGATTATAAGGTAAAGTTTGCTTTCCATTGTTAATACTTTGTATGTCACAAATAATATATAGTTTATACATA AAATAGAAAAGTAATGAGATAACCTTCACAATCATTAAATGAGTAGTTGAGAATGTTTTATCTGAGTACATATGTCATTTTTGTAAATGGAGCACCACAC ATCATTATTTTATAGTTACCAACTATTGATTTTGACTTGCCTTACTTCACGGACACTCTAATCTAGCATTTGGTTCAAGAAAAGAATAGGGTGGAACTGA TGTGAATCTAAGGGGTGACCTATGATTTCGTTAAGAAAAATCATTAGATTAGGAGAACCCTTAGAAGCCTTATTTTTGTTTTTTATTGTTAGCATAATTT CAATTATTTTTAATAAATGAGATTTATATCTCATGGGTAGTTTAGGATGTTATTTAATTTTATTCTAATTTATTTAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_43600; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_18856
| Blastp | Protein LOL1 from Arabidopsis with 83.33% of identity |
|---|---|
| Blastx | Protein LOL1 from Arabidopsis with 89.74% of identity |
| Eggnog | LSD1 zinc finger domain containing protein, expressed(ENOG410YHD1) |
| Kegg | Link to kegg annotations (AT1G32540) |
| CantataDB | Link to cantataDB annotations (CNT0000549) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_016174851.1) |
| Pfam | LSD1 zinc finger (PF06943.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |