Id Trinity | FTRINITY_DN54547_c0_g1_i5 |
---|---|
Name Transcript | Ll_transcript_17777 |
Sequence | AATAGTTGTTTGGAAAAGATAACAACGTAATAAAAAAAATTTAGATACTAACAAAAAAAACAGAATCCCGAGAAGAACGCTCCTCACCATATCATCAGCA CACAACACAAAAACAAAGAGCGAAAGTGAACGAGTCAACGTTAGTACTCAGTAGAGAGAAAAATGAAGAATCATTAACCTCTCTTTCTTCTCTATCTATC AATGATTCATTAACCTCTCTTTCATAACTCACATTTACTCCAAATGAAGAATGCTCCACTTTTATTCATATTCATATTCTTATACTTTCTATCAGTTTCG AAGGCTATCTCGAAACTTGAACTGCAATCTTTACTCGAATTCAAGAAGGGTATAACAGATCCACAGGGGAAGGTTCTAGAAACATGGAAGGCTCCAAAAC GCATCTCATCAGCACCATGCCCTATCAAATGGGTTGGAATCCTCTGCGACGACCTCACCGGAAACGTAACCGCCATCGCTCTCGACAACTTCAACCTCGG CGGAGAACTCAAATTCGAAACTCTCCTCGGCCTCAAGATGCTCCAAAAGCTCTCACTTTCCGGTAACCACTTCATCGGACGGTTACCACCTTCGTTCGGA ACCCTAACCACTCTGCAGCGTTTGGATCTCTCCAATAACCAGTTCTCTGGACCAATTCCCGATACGATCAATGACCTTTGGGGTCTCCATTATTTGAATT TGTCGCTCAATGGTTTCAAGGGAGGGTTCCCGGTTTTGACCAACCTTCAGCAACTCACGGTGCTCGATTTGCATTCTAATGACTTCTGGTGTAACATTAG TGAGGTGGTTTCGTCACTGCGAAACGTGGAGATTGCCGATTTAAGTGATAATATGTTCTATGGAGGGCCTCAACAAGTAAGGGATATTAGGGCGTTTGCT CATTCAGTTAAGTTTTTGAATTTGAGTCAGAACAGATTGGATGGCCCTTTCTTTGGGGTAGATTCGATGACGTTGTTTGGAAACTTGGAAATTTTGGATT TGAGTAATAATATGATCGAAGGACAGCTTCCTTCTTTTGGGTCATTTTCCAACAAATTTCGGGTTCTGCGGCTCAGGCATAATTTGTTGCTTGGATCTGT ACCGGAGGAGTTGTTGCAGAGTTCATTGTTTTTGGAAGAATTGGATCTTAGTGGAAATGGGTTTACCGGTGAATGTTTCTTTTCATTTATTTCTCTTATT GAGTTTTGACTAGTTCACCAATTATAGAGAGAGAAGGAAAAGAGTTTCAATTTTGTAGAGATTCCTTATGTTATGCTTGAGTGTGATGTTGGATATTTAT AGGTGTCATAATTTAAGTGCTGATCAAGCATAGTGTTGTACTGAAACAATATTTTGGGGAAAACTAACCAGTGGAGCTTTAATCTAAATTTATCATTTTA TTTTTCTATTTTAACCTTTTTAAATGTGTCTTTATGAATGAATTATCACTATTTAAAGCTCTTTCATACCAGCTCAATTTTAGGAGTAGACTTGTTGACT TTATCGTATTCATACCTGTGATTGAAATCTAATCATAAAATTTTCATTTTGTGAGTGTGTGCCTGAACTTTCAGCTTAGTAATTTTAGGTATTTAAAAGG TGCATCACTGAAAACTTGGACTTTTTTGTCATTGCATTTTGTTCTATTACAAATGCCACTGGTGTGGCGAGGAGTGGAGGATGGAGAAAGAATGTTTACG GGAAGTTTATAAACTCTATTTTGTGCATGTCATTGAACATAGACAAGGAGCTATGAACTAAAACCTACACACACACACACACCCATTTGAAGAGGGGGTG GGGTATAGAGAAAACATGGGAAATGATGATGGGTAAGGGGTGGGAAGGAATGATGGCTAATCTCTGTTTTATGTATTTCGTCTAAGGAACACTTTCTTTT TGGATGGTGTTTTTGCATCTTATGGGGCTTGGTGATTGGCTCACTTGTTATGTTGTGTTACAGTGATCACTGATGACCTATGAGTTCTTCTCCTTCAGGT TGGCTTATATAGTCCTGAACTATCCAGTGTTATCTTGCAGCATAAACTTTTTCCTCTCCGTTTACTCCGTGGCAGATTTTGGAATTGTTTTATATGTTTT CTCCATTGAATTTCTCTTTGTTTACTCTTGGCACTTGCTAGTAGTGTTATTCTACTTACTATATCATTTGAAGTTTGTGTTTTGCAATTGAAGTTGCATG TTTCAACTTTCAAGTGAATATACCAATTTGATTTTACTTTTATCAACAGAACTTTCACAAGGCCCTTTAAATTAAGTACATAATGATGATTGCATCAAGG TTTCTTTAATGATTAGCAGGATAGATTTGTGATGTATTTCAAAATTTAGGATACATTATTTAGACAAAAAAGTCAGTGAATTCGATTGTCGTCTAATTAA TTTACACATATACCTTATTTACAGGCTCAATTTCTGTAATCAACTCTACAACGTTGAATATCTTGAATCTTTCATCAAATCGTTTATCAGGCTCTTTGCC AAGTTCCTTGAGCAGATGTAAAGTTGTAGACTTCAGCAGGAATATGTTTTCTGGTGACATTTCTGTTATACAGAGCTGGGAAGACACATTGGAGGCTATT AATCTTAGTTCAAACAGGCTGTCAGGATCCTTACCTCCTGTTTTAGGGGCATATTCTAAATTGTCTAGGGTTGACTTAAGTTTAAATGGACTTACTGGAT CCATCCCAGGTAGTTTAGTTACTTCATCATCACTCACAAGCCTGAATCTTTCTGGTAATAAATTTACAGGGCCACTTCCACTTCAAAGTTCAGGGGCAAG CCAGATACTACTTATGCCTCCTTATCATCCCTTGGAATACCTTGATGTATCTAGTAACTTCTTAGAAGGTGACTTGCCTTCTGATATAAGTAAGATGTCT GGGCTTAAACTGCTGAATCTGGCTAGGAACGGCTTTACCGGAGAGCTGCCGAATGAATTGAGCAAACTTATTTATTTAGGGTACCTTGATTTGTCTAACA ACCAATTTACTGGGAAAATCCCTGATAAGCTTTCATCCAACTTAATTGTATTTGATGTGTCCCGTAATGATCTCTCTGGTCATGTCCCTGAAAATTTGCA GCGGTTCCCTCCTTCATCATTTCACCCTGGGAATGAAAATCTAATCTTAAAAGATAAGTTTCCGGCAAATTCAGTGCCTGTTAATGATAAAGGGAAACAT CATAGTTCAAAGGGTCTCACGGTAGCAATTATTCTTGCATCTTTAGGAGCTGCTGTGATGATTATTTTTGTTCTATTGGCATTACATCGAGCACACGTCA TAGAATTTCATGAAAGAATTGAGTTCAATGATCAAAATGCTGGAAGAGGTGTCAAGTTACGAAGACTTACAAGGCCTTCACCCTTCAAGTACAATAAAAA TGCTCATCCCCCAACAACTTCAATGAGCTTATCAGATGATCATTTGTTGAGTTCTAATTCGAGGTCACTCTCTGGGCAGATAGAATTTACATCTGACATT TCTGACATTGCCTTACTTCAGGGAACAGTGACTGCTACTTCAGCATCTGCAATTCCTAATTTGATGGATAACCCTCCCGCATCATCTGAAAGGAACTCAT TTCATAGCTCCCCATTGTCATCCTTGCCACATTTTATAGCAGCTGGTGAAAAGTCAGTAATGCTGGATGTTTACTCACCGGATCGACTGGCTGGAGAGTT GTTCTTCCTGGATTCTTCCCTAGCATTCACTGCAGAGGAATTATCTCGTGCTCCAGCTGAAGTTCTTGGCAGAAGTAATCATGGCACTTTATATAAAGCT ACTCTGGACAGTGGTCATTTGTTGACTGTAAAATGGTTGCGGGTGGGATTAGTGAAACATAAAAAAGAGTTTGCTAGAGAAGTTAAAAGGATGGGTTCTA TGAGGCATCCGAACATTGTCCCATTGCGAGCATACTATTGGGGGCCTAGGGAACAAGAGAGGCTTCTTTTAGCTGATTATATACACGGGGACAACTTGGC GTTACATCTCTACGAGACCACGCCAGGGAGCTACTCGCCATTATCATTCAGTCAGAGATTAAGAGTTGCTGTTGATGTTGCTCGATGTGTTTTATTCCTT CACGATCGAGGGCTTCCACATGGGAATCTAAAGCCAACAAATATTTTGCTATCAGGCCCTGATTACAGCGCATGTCTTACCGACTATGGCCTGCACCGGC TTATGACACCTGACGGAATTGCAGAACAAATACGAAATCTAGGAGCACTTGGATACTGCGCCCCAGAACTCGCTATGGCACCAAAACCAGTTCCATCTTT TAAGGCCGATGTCTACGCACTTGGCGTGATCTTAATGGAAATATTAACGAGAAAAAGTGCAGGCGACATAATATCAGGACAGTTAGGTGCAGTTGATCTT ACAGATTGGGTTAGGCTCTGTGCGCAAGAAGGAAGGGTAATGAACTGTATTGACAGAGATATTGCTGGTGAAGAAGAATCTTTCAAAGGAATGTATGAAC TGTTTGCAATATCTTTGAGGTGTGTTCTTCTGGTAAATGAGAGGCCTAACATCAGACAAGTTTATGATGATCTGTGTTCTATATTGGTTTGAATTTTTTG TACATTCATCTGGGAATTAGTTTTTTTTTATTATTTTCGGTTCTTCAACCCATTGTTATTTTCTGATTCTTTCTATTCATATTTTTTAGCTCCTCACTTA ATTTGATTCTAGCCTTAATTTTTGGCTAATGATTACATTCTTTTCTAGCAAAAACAACATTTATTGTAAAGAAGCAATCATTTATTAATGG BLAST |
Tissue | flowers |
Gene name | LI_gene_43621; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_17777
Blastp | Probable inactive receptor kinase At5g10020 from Arabidopsis with 58.58% of identity |
---|---|
Blastx | Probable inactive receptor kinase At5g10020 from Arabidopsis with 59.09% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT5G10020) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019430241.1) |
Pfam | Leucine Rich repeat (PF13516.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |