| Id Trinity | FTRINITY_DN54570_c0_g1_i18 |
|---|---|
| Name Transcript | Ll_transcript_19218 |
| Sequence | GCCACCGTCAAATTCAAACCTTCTCTCCTCCACCGCCTCCTCGCCCACTCCGGCGATCAACCTCCCTAACATTCCAACACCCTTTTCTCAGCCAACATGG CACTCTTTCTCCACCACAGAGCCACCGTCAAATTCAAACCTTCTCTCCTCCACCGCCTCCTCTCCACCTCCGGCGATCAACCTCCCTCAGATTCCAACTC TCCATTCTCTTCCGTTTTACGTGACATCAAACATTCTCTCAAACAACAAAACCAATCCTCTTCCTCTTCCTCTTCTCTTCAAGAAATCCAACGCAACCTC TCCGAGTTCCGCCGCCGCACCTCCGCCACTCCTCCAAACTCCGGCCAGATCTCCTTCCAAGAACTCTATAAGCGTAGCCTCGCTCAAAACCCCGATGATG AGTCATCGTCGCCACCAACCGCAACCGGCGTTGGGAATCTCGATTTGAACAGCGCCAAGCCTAGTCGCGGTCCGGTTGGCTTCGACGCGATTCGCGAGAG CTTGCGGCAGATGAAGGCTGATGGCAAGGGAGGGGATCGAATGTCATTGCCTGCTTACAGAGATGTGTTGAAATCGAGGCCTTCGGCGTCGTCGTCGAAG GTTTTCGGAGGAACGAGCGAGTTACCGGAGTCTGTTTTTGGACCGGAGTTAAGGGGGAGGTTGAGGAAGGATGATTCATCGGTGGCGGCGGCGATGAGGA TGGAGTTTGTGAAGGTGTATGGGGCAGAGGAATTGGGAGAGAAATTGAGGAAGCTGAGGCCAGAGAGAAAAGAGAAGGATTGGTTTTCAATCAAGGAGTT GAATGAGAGGTTGATTAAGTTGAGGGAAATTGAGGAGAAGGAAGCTCGTTCTACAGTTAAAGGGGTTGACTATAATGATTTGAGAGAGAGCTTGCTTCGT GTAGTGTATGACAAAGACAATGCAAAGAAAAATTCAGTACAGAGAATGGAAATCTTGAACCAGATTGGTGGCGCTCCAGAGTACTTGATGGGGCCTCCTA AAGAGCATCTTGTTGAAAAATACTTCCATCCGGATAATATGTCTTCGGCGGAAAAGTTGAAAATTGAGCTCACAAAGGTTAGGGATGAGTTTAAAATGTC GGAGTCAGATTGTGGATCAGCTCGTGTTCAAGTTGCACTACTCACAACCAAGATTAAGCATCTATCAGCTGTTCTACACAAGAAGGATGTGCATTCTCGT AAAGGTCTGATAGCAATGGTTCAGAAGAGAAAGAAGTTACTTAAGTACCTGAGAAGAACTGACTGGGATTCCTATTGTTTGGTTATTTCTAAGCTTAATC TACGTGATAATCCAGAACATACTâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_43773; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_19218
| Blastp | 30S ribosomal protein S15 from Aquifex with 54.67% of identity |
|---|---|
| Blastx | 30S ribosomal protein S15 from Pseudothermotoga with 52.44% of identity |
| Eggnog | Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome (By similarity)(COG0184) |
| Kegg | Link to kegg annotations (aq_226a) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443361.1) |
| Pfam | Ribosomal protein S15 (PF00312.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |