| Id Trinity | FTRINITY_DN54572_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_19134 |
| Sequence | CTCTTTCTAAACCAACACATTCCTCTCAATAACAATAACAATTCTATGCTCCAAAGGTTGAGATTTGTACACTCTTCTTCTCTTCTCCATCATCATCATC ATCACCTTTTACACCAACCCACTAAATCAAAATCTCATTTCTACAATTACCAATACTACCCTTTCTCAATTCCACCTCTCAAAGTGTTCTCAATGGCCAC GTCATCATCTTCATCTCATTCTCATAACTATACTAATCGACTTGTTTCAGAACAAAGCCCTTATCTTCTACAACATGCACATAACCCAGTTGAATGGTAT CCATGGGGTGAAGAAGCTTTCTCTATAGCACGCAAACGAGATGTACCTATCTTCTTATCAATTGGGTACAGCACTTGTCACTGGTGTCATGTCATGGAGG TCGAGTCTTTTGAGGATGAAGGGGTTGCCAAGTTGTTGAACGATTGGTTTGTAAGCATTAAGGTGGATAGAGAGGAGCGGCCTGATGTTGATAAGGTATA CATGACGTATGTGCAGGCTTTGTATGGTGGAGGAGGTTGGCCCCTCAGTGTGTTTCTTTCCCCTGATTTGAAACCTCTAATGGGTGGAACTTACTTCCCC CCTGATGATAAGTATGGAAGACCGGGATTTAAGACTATACTTAGAAAGGTAAAGGAGGCTTGGGATAGTAAGAGGGATATGCTAGTTAAGAGTGGAGCGT CTGCAATTGAACAGCTTTCTGAGGCATTGTCTGCTAGTTCCATTTCCGATAAGTTGCCTGATGGAGTTCCGGAGGAAGCATTAGGCCTATGCTCAGAGCA GCTCTCTGGGAGCTATGATTCAAAGTATGGTGGGTTTGGATCTGCACCGAAATTTCCCAGACCAGTTGAGATCAACTTGATGCTTTACCACTCCAAAAAA TTGGAGGATACTGGGAAGTTGGGGGAAGCTAATGGAAGTCGGAAAATGGTTTTCTTTAGCTTGCAATGCATGGCAAAAGGGGGCATTCATGATCATATTG GAGGGGGGTTTCACAGATATAGCGTGGATGAGTGCTGGCATGTTCCACATTTTGAGAAGATGCTGTATGATCAAGGGCAGCTTGCAAATGTTTATTTAGA TGCCTTTTCTATAACAAAAGATGCTTTCTATTCATGTATAGCACGAGATATCCTTGATTATTTGAGGAGAGACATGATCGGTCCAGAAGGTGAAATTTTT TCGGCAGAGGATGCTGACAGTGCAGAGTTTGAAGGAGCTGCAAGAAAAAAGGAAGGAGCCTTTTACATATGGACCAGCAAGGAGGTTGATGACATACTTG GAGACCATGCTGCTCTTTTTAAGGAGCACTATTACATAAAGCAGTCGGGTAACTGTGATCTGTCTAAAATGAGTGATCCTCACGATGAATTCAAGGGAAA GAGTGTGCTGATTGAGAGAAAGGATGCTTCAGAAATGGCAGAAAAATATGGCATGCCAGTTGAGACATATCAAGAAATTCTTGGAGAAAGTAGGCGTAAG CTGTTTGAAGTAAGATCAAGGCGGTCAAGACCACACTTGGATGATAAGGTTATTGTATCTTGGAATGGACTGGTAATCTCATCATTTGCTAGGGCTTCTA AGATTCTCAAGTGTGAAGCTGAAGGGACCAAATTCAACTTTCCTGTTGTTGGCACTGAACCAAAGGAGTACCTGGCGATTGCAGAAAAGGCAGCATCCTT TATTAGGAAGCAACTTTACAATGCGGAGACTCGCAGGCTACACCATAGTTTCAGAAACTCTCCATCTAAAGCTCCTGGGTTCTTGGATGATTATGCTTTT CTGATATCCGGATTGCTGGATCTCTATGAGTTTGGCAGTGGAATCAACTGCCTCTCGTGGGCAATTGAATTACAGGAAACGCAGGATGCTTTGTTTCTTG ATAGGGACGGAGGTGGATATTTCAATAATACAGGAGAAGATCGTTCAGTTCTTCTCCGTGTGAAGGAAGACCATGACGGGGCAGAACCCTCTGGGAACTC AGTTTCCGCTATAAATCTTATAAGATTGGCATCCATGGTTTCCGGAAGTAAAGCTGAGCATTATAAGCGAAATGCAGAACATCTTCTGGCGGTTTTCGAG AACAGATTGAAAGATATGGCTATGGCAGTACCTCTAATGTGTTGTGCTGCAGACATGCTTCGTGTACCTTCTCGAAAGCAAGTGGTTGTCGTCGGTGAAA GGACTTCCGAGGAATTCGAAAGCATGCTTGCTGCAGCTCATTCATTGTATGATCCCAACAGAACAGTTATTCATATAGATCCTAACAATGAAGAAGAGGT GAAATTTTGGGAAGTAAATAACAGCAACATTGCTCTCATGGCTAAGAATAACTATAAAGACAACAAGGTTGTTGCTCTTGTATGCCAAAACTTCACTTGT AGCCCTCCTGTGACTGATCATTCTTCACTTGAAGCCTTGATCTCCCAGAAATCCCCATCTTATTCCACATAAGCTTTAAGCTAATGGTCATAATTTATGG TGGGTGGGAAATAAATTGGATACGAGTCTCGGCGAAATGGTAAGGTTATTTGTCTTGTGACCTCGTGCGCTGAGCCACCTTTTTAATGTTACTTGATGTA TGGTCTTCATCTATAGAATTTGCCTGGTTCTGACTTTTGTATCCCCTTTTTATATTCTTCATTGGTATTGGATTTATTCACATGCTTTTTTACATACAAG GATCCCATGTCCTAAAAAAATCACGTTTAATATCTATAAGCCAATCAAATTTCAACAAGTAACAATATATATTTTTAGTTTATATTTTATAATTTTCTTT TTAATTAAACATATTTTGTTAATTGAATGATGAGGACACAAAATGTGTGTAATTTATAATATTCATTCCTTCTCTTTTGCATGTCTTCAAGAAGCTAGAA TTGTGATCCAAAATTGATACATAATGTATATTTTGTAGGTAAAGCTTGAAGAAAATTATTTTCTTTTTCAGTAATGTGGAATTTTCCATACAAAGTTTGT GCCTCATTTTTTCTCGATTAACTGGCATAGTGGCCATGGCATGGCAAAGGAATTATAAATCCGGATGCAAATTAGTTAGGTAAACCTTACACATATAAAG GTTAATAGCAATTTGAACCACGAAGGATGATTGCCAACTACATCGGTCATTGTGGGATCGATAGTCGGTGTTACATCGGTCATTGTGGGATCGATAGTCG GTGTTACATCGGTCATCGTGGGATCGATAGTCGATGTTTGGATGCTCCATATTACTCGTTGTGAAGGTGGACGTTGAGTATTTCCCTTCATAATTGTTTG ATAAGCTTAACTAAGCCAACCCATATTTTACAAGATGGCTCATCCATCATGTTTGGTTGGAGTTGTTTTTAATACTTAACCAAGGTTGGTTTGGTTTCCT TTGTATGAAACTAAGAATTCATAGACTAAAAAGTTGTGACTGTTATAGAAGCTTGTATCATCACATTCTTATTAGATTCTTTATCACCTATAGTTCTTAA ATCCCTTCTTTCCTTTGTTACTTCATGCTATCATTTTTGTATAATTTCAAACATTGAGAAGTTTTACACTAGAGAGA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_43789; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_19134
| Blastp | Spermatogenesis-associated protein 20 from Homo with 41.28% of identity |
|---|---|
| Blastx | Spermatogenesis-associated protein 20 from Homo with 41.48% of identity |
| Eggnog | mannose-6-phosphate isomerase activity(COG1331) |
| Kegg | Link to kegg annotations (64847) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419202.1) |
| Pfam | Protein of unknown function, DUF255 (PF03190.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |