Id Trinity | FTRINITY_DN54573_c4_g2_i1 |
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Name Transcript | Ll_transcript_17674 |
Sequence | GTGTCATACATGCAAATCATACAAAGGCAAATCTCTCTCCTTTCTTAAAGTTCATTTTTACTTTCCCATAAATCTACTCTACCCTCTCCAACACCAACAC TCCAAAAGTCTCTCTCATTTCTCTCCCTCCCTCTTTTCTTTTCTCTGTCCAAATTCTTCAAAGTTCAAGGTTTAAATCTTCAACCACAAAATCCCATCAA AATAATAGTGTAGAGGAGGAGTAAGAAGCAAAGAAAGAAAAAATGGTGAGCAAGTTGAATCTCCCTATCATAGACCTCTCTTCACATGACCGTCTTTCCA CAGCCAATTCCATCCGTCAGGCATGCATGGAGTATGGTTTCTTTTACCTTGTGAACCACGATATTGAGAAGGAGTTTGTTGAAGAAGTGTTCAACCATAG CAACAACTTCTTCTCACTTCCACATGAACACAAAATAAACTTGGCCCGCAAAGCATATAGAGGTTACACTCCTCTCTATTGTGAGCAACTTAATCCTGCT CCAAACTCCAAAGGTGACTCCAAAGAGAGCTTTTACATTGGTACATTAGAAGATACCACAAGTGCTAACCTGAATCAATGGCCTTCACAAGAATTACTAC CAGATTGGAAGCCAACAATGGAATCATTTTTTTGGAAACTATTGGCCACTGGAAAAGAGCTTCTGTCTCTAATTGCCCTGTCCTTGAATTTGGATGAAGG ATTTTTTAAGAAGATAGAGTCCTTAAACAAACCAGAAGCTTTTCTTCGCCTTTTGCGCTATCCAGGTTCATTAATTTCGCTTTTTCTAGACCTGTTTAGT TAGCAAAAAGCAGATGAACTTTCTTCCTTGTTGATTTTTATCTTGTTATGTTTATCTTTTTTACTTGATCTATATTGTACAGGAATATTGGTACTAGTTC ACATGACAACTTTGAAATACATAATGCAATATATTTAATGACAACTTTGGTGGGAATTGAAGTTTGTGTTTGATATAATATACTCTTTGTTCTCTGTGTT GTTTTATTAGTACTGCATGATTACATGTTTTTCACACCAATTATACTATGTGACCTTTTTACTATTGATATTTCATAATATGCTTTCCAACTGCATTAGG TGAATTGGGATCTTGTGAAGAGGAATATGGTTCCTCTCCACATACAGATTATGGCATGATCACTCTCCTATTGACAGATGGTGTTCCAGGACTTCAGGTT CTTTTCTTTCCTCATGTGTGCCTTATCTATTAGGGGTCTATCATGGGACATTTTGATTGGCTTGGGACATAAATAGGGACACCATTGGGACATAAAATCT TCATTCCAAATTGATACACCAAAAATACTAGAGCCACCAACTTGACCCTCCAAAGAAATACCACCAAATAAGTCATTCAGTTTAAAATCTCAACTCGTAG TGTAAAACTGAGTACCTTAAAGAATTAAATTGCCACCAAATAAGTTTTTAGAATATCAATTTGATGACACCTTTAAACTTCGAGGGACTTATTTAATGCA ACTTCTCTTTGGTCCAAAGTTTGTGGTAATTATATCTCTAGGACTAACTTTTTGGTATAAATAAGGATATTCCTTCACTCCATGCGTAAGTAACTAATAA CTTTTGGGGTGCGTGGTTACACCATCGAACAAGTGTTGTTCACAGAAATTAAAACTTTGACCTTCTGGCTTATCCAAGGATTAGTGGGGGCTTATAATAC TATCAATTTTACAACTCTTATACTTGCAGATTTGCAAGGACAAGTTCAAGCAACCTCAAGTCTGGGAAGATGTAACTCATGTAGAGGGGTGAGTCCATAA TAAATAAATTTTGTAAGGAATAAATTACTAATTTTAGTATGATTTGAATCACAAGTGAGAGATATTTAATCTAGAAACTCTATACTACTTTTCCATTAAA AACTACTCTTCCTTCCTCGTGTTAGGTTTTTGTGTTTATATATGCAGGGCCTTTATTGTGAACATTGGGGACATGATGGAGAGGTGGACAAATAGTTTGT ACCGGTCAACACTTCACAGGGTTATGCCAACAGGAAAAGAGCGCTATTCTGCGGCATTCTTCTTGGACCCGCCCTCAGATTGTGTGGTGGAATGCTTTGA AACTTGCTGCAGTGACTCCTCTCCTGCCAGATTCCCTCCAATACGTAGTGGGGAG BLAST |
Tissue | flowers |
Gene name | LI_gene_43803; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_17674
Blastp | 1-aminocyclopropane-1-carboxylate oxidase from Dictyostelium with 31.89% of identity |
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Blastx | UPF0676 protein C1494.01 from Schizosaccharomyces with 33.04% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019446067.1) |
Pfam | non-haem dioxygenase in morphine synthesis N-terminal (PF14226.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |