Id Trinity | FTRINITY_DN54581_c5_g1_i12 |
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Name Transcript | Ll_transcript_19316 |
Sequence | TTCTCGCCATAATAACAGTAACACCATTACTCTTCAACAACAACAACAACAACCTTTTGCAATAACAAAAAATCTCGTTCCTTTGACCCTACTCCATAAC GCGAAACAAAGAGGAGCATTGTGCTTGGATGGGAGTGATCCAGGGTACCATTTTCAAAAGGGGTTTGGATCTGGATCTCATAATTGGTTGCTTCACATTG AGGGAGGAGGGTGGTGCAATTCAATAGCTTCATGTTCTCATCGAAAAACGACTCCTTTGGGGTCATCCAAGTATATGGAAACAGAGGTTCCTTTTTCAGG AATATTGAGCTCTGACCCCTCTCAGAATCCTGATTTCTTTAACTGGAACAAGGTGAAGATACGCTATTGTGATGGTGCATCTTTTGCTGGTCACCCAGAA AGTGAGATTAAGAAAGGAAGCGGGTTGTTCTTCAGAGGCCAGATCATATGGGAAGCTATCATGGATGAACTTTTATCAATCGGCATGTCTAAAGCAAAAC AGGCTCTGCTTTCAGGATGCTCTGCTGGAGGGTTAGCAACCCTTATACATTGTGATGACTTCCGTGAATTTTTTCCGAAGGAGGCAACTGTCAAGTGTCT TGCTGATGCAGGTTTCTTCCTAGATGAGAAGGATATTCTCGGAAATAGTACAATGAGATCTTTCTATCACGATGTTGCCCAGCTTCAGGGTGTTGTAAAA AGTTTACAGAAAGATTGCATTGCAAAAATGGAACCATTTAAGTGTCTCTTTCCGTTGGAAATTATTAAAAACATTAAGACTCCGGTTTTTCTCGTTCACC CAGCTTATGATTTCTGGCAGATACATAATATTTTGGTACCTCAAGGATCAGATCCCCATGGTCACTGGAAAAGATGCAGATTGAACCTTCTCAATTGTAA TGCTAACGAGATTGAAATACTTCACCATTTCCGTACTTCTTTGCTGAAGGCCGTGAATGAATTCCAGCAACGAGAGGAGATTGGAATGTTTATAGATTCC TGCTTTATTCATTGCCAGACTTTGATGGAAGAGACATGGCATTCACCCAATTCTCCTAGAATAAATGATAAGACAATTGCCGACTCTGTTGCGGATTGGT TCTTCGACCGAAAAGTAGTAAAGCGAATCGACTGCCCTTATCCATGCAACCCCACTTGCCATAATATGGATTTCAGTACCAGAATATAGTAAAATGCCTC ATTTTTCATTGTCAGTTAATCTTGGATATGCATTTCTTCAAGTTCATTAAGGAATATCTTCTCATTTATATCCTTATTGGGTTAGAGAGTATGATGGGTA GATAACTCAGTATATGAACTAGGTTTCATATTTATCTGAATGAAATGGGTCTTACCTCTCAGTTTATACTCTATGGCCATTAAGAAATGCAGCATGAAGT TCATATAGGACCTTTCACCCTTGTTACAAAACTCATTGTATCATTCATTTCCCTTGTGCAACACACTAGATTTTTGTGTAATTAATGGTATTATTATTAC TAAAAAAAACCTGCATATGTGTGCTTGGTGCAATATAGAAGGAGTCGTAAGTTAAATAAAAAGTGAAAGTTGTATTAGATAGTTAAAGGTCAATATAAAA TTTTGTCGAATATGTATGAGTGATATTATTAGTTTATTACTAAATGTTTTTAGCAACAACAACCAATTCTATTTCAACTACGTG BLAST |
Tissue | flowers |
Gene name | LI_gene_43906; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_19316
Blastp | Pectin acetylesterase 5 from Arabidopsis with 65.08% of identity |
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Blastx | Pectin acetylesterase 5 from Arabidopsis with 65.6% of identity |
Eggnog | pectinacetylesterase(ENOG410XQKD) |
Kegg | Link to kegg annotations (AT3G09410) |
CantataDB | Link to cantataDB annotations (CNT0001012) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019431276.1) |
Pfam | Pectinacetylesterase (PF03283.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |