| Id Trinity | FTRINITY_DN54582_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_17786 |
| Sequence | TGGTGTGTCACTAATAAGTGAAGTCAACACACACACACACACACCTTAATCTTCATCCTTTCACTTTCCTATTTTCCTTCCCTCTCTTTCCTTTCTTCCG ACATTCCCTCCATTCCCTCAATTCCTTTCATTCCCTCAATTCCTTCCATTCTCTCCTTTCAATTTATTTTATTCTTTCCCCCTACAATTCAAAACTCTCT CTTCTCTTTCCTTCCTTCCTAATTTTTCTACTCCATTCATTCTTTTTTTCTTCAATTTCTTCTTCAAATGGACGAGTTCGGTGTCTTGACCCAAAGGTTT GGGTTGAAACCGCAAGGAAAATCAGCTCCAATGGCTTCATCCAAACTCTCCAATTCCAATTCTGGTCTAAACCCCAAAACTTCCCTAAACGGGTCTAGAT TTCATCAAAATTCTAATTTTGATTTCAATTTCAGTTCTTTTCCAAGCAGCAATAAAAACCCACATCATTTTGATGCCATTGATGATATCTTTGCTGGTGG AACCGTTAAATCGAATTCCAATAAGGGTGGTTCGTTTGATTTTGTGGATGATATATTTGGTGGATTTCCTAAGAAAAGTGTTGGTGTTGATGATCTATTA GATAAGATTGGTGGGTTTAATGCAAATGGTGCTAAAAGTTTGAATCATAAAAAATCATCTGATTTTGATGATTTGATACCTGGATTTAATGGAACAAGTC CTTCAAATAATGGTAAAGCAAGTTTTGGGATAAATAAGCCTCATAAACCAACTGCCACATCTCAAGATGATCCATTTCTAATATTTGAAACCGCTTCTAG CACAGCATCTTCAGATTCATTCCTGGACTCACTGGACGAGATAAGTAAGTTAAATAATTCCCAGGGTACAAGAAGCAGCTCTAGTAGTAGTACCACTCCA TCATTGAGGCCTCCACCTAAGCCAACGAATGTTTCAAACTCAAATAGAGTGAACAACTCAAATGTGTCTTCAATAGATGAGCTTGAGAACTTTGCTATGG GCCGGGTGCAGAATAATGGTAGTAGAAAGGCCAATATTAATACTAGTGAGATTAAACAAAACTCACCAGCTAAGACAAACAGAGGTAAAGGATCTCCAGC TACAAGAGTGGATAAATCAAATGACATGGGCGATCTTGAATCTTTCTTTGGCATGGGTGCTCGATCAAGCAGTGCGCCGAAGTCCAGGGCTGCACCTATG GATCATATGTTTGATCACCAAATAAATACAAAAGGGAGATCTGAGACATCACAAAGGGTGCCATCTGGATCATCAACCAGTGTGAAAAAATCTTCCGTGG TGACATCTCTTGATGACCTATCATTGATTTTCGGTGGTTCCCCATCATCTGAATTCAAGGAAGTTGAAGGGGAAAACGAGGAGAGACGAAAAGCAAGATT GGGACGTCATCAGAGAACACAAGAGCGAGCGCAAAAAGCAGTTGCTGATATGAACCAGCGTGACCTTCAAACAAAGATGGAGCAAGAAGAGAGACATAGA ATTGCTGATATTGTGAATGCTCAGATAAAGCGTTGGGCTGCAGGGAAAGAAGGCAACATGCGGGCATTGCTATCAACATTGCAATATGTATGCTCTTTTA CCATGACCGATGTTAATTATTAATACTTCATTTAACTTCAGGGCTCTCGAACATACCTCTTTAGCTCTAGCATTCTTAGCAACTATCCGTAAGAAAATAT AATTTCACCAATGGAAATGGAAACATCAGGTCTTTTGGCCTTGTTTATATGGCAGAGTCATTTATAGCCACGACTGAGAATAACTGTCACTTGGCATTCT AAGACAGAACGATTAAATCCAGCCTAAAAGGCTAAAATATCAACAGATGGAAAGTGAAGAAACAGTATGCCATTTTAGATGAACTTGATTTTTCAATCAA TTGTCTTGCGACTCTAACCTTATCAAATGTTCTGTTTATTTTGTTTGTGTTTAAATTGTCTTCTGTTTACTGAGCATAAGTTTCTTTTGGTAAGGGGTTC AAAATTATAAGAACTGTTTGAAAGTAAAGGTACCCTTGATTGTGCTATTTAGCACTTCATGTGTAGTATATGACTTCGGTTAAGTGGAGGCTTTGGCCTT GCGCCCTTTCCAAACTCTCCTCGGTCATTTAGCGGATCTGTAGGGACACAGGCACACAGCTAGCTTTGGAATTTCTCACTTTGTATGGGTAGTCACCAGA TGTAGGGAAGATTGAAGGGTTTATACTTCACTAATCATGATATGATCACTGTTATAATACAAACTTTAGCCTTTTATTTTAAAGTGTGCTGGGCAGCAGG GACAAACTTTCAATATTTTATTATTATTTCAAAGCCTAATACAAAGCAAATACTTGTGTAGTTTTACTCATTTATTATTGTGATACACAAATGCTATTAT TATAAGATTTTTTATGTAATTTATATTTTGTTAAGGGTTGAGTAATCCTTAATACACATTAGTAATTATATATTTATAAAAAAATATTACATTTTTTGTA CTATAAATTTATATTTGTATCGCCCCCCACAACCTAAATTTTTTGGGTCCCTCCCTGCTGGGCAGTTCCAAATGCTAAGGTAGATTTTTTAGCTTTAACA GGCAACTGTGAGGTCTCATGTGTATTCTGTTTCCATTTAGTGATGAATAATTCTATAATTCATTAGTTTTTTATATGTTATATTTTTGTATCTCTAAAAC AAATTTCTTTTATTCCATGACCTTTTTCTTACCTTTGAAACTATTTGCAGGTTCTTTGGCCAGAATGTGGGTGGCAACCAGTGTCTCTGACAGACATGAT TACTTCCACTTCAGTTAAAAAAGTTTATAGAAAAGCAACATTATGTATTCACCCTGATAAAGTCCAACAGAAAGGTGCTAATCTTGAACAGAAATATACT GCAGAGAAGGTTTTTGACATCCTTAAGGAAGCTTGGACCAAGTTCAATGCAGAAGAACTTTCTTAAATGCCTATGCTAGTTGTCCTTTCAAATCAATAGA TCTATCTAGAACTTGTTTTCTTAATGCATGAGCATGATGTTGAACTCTACTGTATTTTGTGCATGTTGTAAGTAATGCTGATTCTACCTAAAATTCAGTT TAGACATGCCTAGCTAAATTTCATTCATCCCTCTCATACTAAATATTTTGTGGAAATGGGGATAATTCAATTATACTCTTGGAAGATGTAATTAGGTTTG TGTCATTGTTTTTCCATTGAAATTTGTGTGCATATTGATGTGTTGTATGAATAGAAATGTCCCATAAGAAAGTGTTTGTTTACTTTTTAAAATTTTGAGT GTCATTCATCTATTTTGAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_43915; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_17786
| Blastp | Auxilin-related protein 1 from Arabidopsis with 51.72% of identity |
|---|---|
| Blastx | Auxilin-related protein 1 from Arabidopsis with 88.57% of identity |
| Eggnog | DnaJ domain(ENOG410YDCT) |
| Kegg | Link to kegg annotations (AT4G12780) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414221.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |