| Id Trinity | FTRINITY_DN54591_c4_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_16821 |
| Sequence | CCAAAACATTGCTTAAGGTATCACTTGAACCAACGATCGTTGGTTGAAAAAAATTAAGATACCGAATACCAAAATAATAATAAAAAATTAAGATAAAGAT GAAAAAAAAGTATAAAAACCCTTATTATTATTGTTTTTTGATAATTGGGTTTGAGAAAGTCTTGTGAGGTCAATAATTCACCATAACCTTCTTCTTTCTT CAATCAATGGCTTCCGATCTGGAATTGAAGGCTAAAGAGGCTTTTGTGGATGATCACTACGATCTCGCCGTTGAACTTCTGACTCAGGCTATTCAACTCA GCCCCAACAACGCTCACCTCTACGCCGACCGTGCCCAAGCCAACATCAAACTCCACAACCTCACTGAGGCTGTTGCCGATGCAAACAAGGCAATTGAGTT GAATCCTTCTCTATCAAAAGCATATTTCCGCAAAGGTACTGCATGCCTCAAGCTTGAGGAATATCAGACTGCTAAGGCAGCTTTTGTGATTGGTGCTTCA TTGGCTCCGGGAGAATCAAGATTCACTAATTTGATCAAAGAATGTGATGAGCTCATTGCAGAAGAATCTGGTGTCATACCCATACCAGAAAATACCACAT CACGGGATGTACCTACAGAACATGTTCAGCCGGAGAATGATGTTCCAGAGCAGCAGGCAGTAACAGTGGCTAAACCTAAATACAGACATGAATTTTACCA GAAACCTGATGAAGTGGTTGTTACAATATTCGCAAAGGGCATCCCGCGGAACAGCATTACTGTTGACTTTGGTGAACAAATTCTAAGTGTTATCATTAAT GTCCCGGGCACAGATATATACACCTTTCAACCTCGCTTATTTGGAAAGATCACACCTGCTAAATGTCGGTTCGAAGTTTTGTCTACCAAAATTGAAATTC GCCTTGCTAAAGCAGAACTTATTCACTGGACTTCTCTAGAATTCAGCGGAGGTGTTATAGTTCCCCAGAGGGTTAATTTTTCATCAGTTGCTGGAGGTCA AAGACCTACTTACCCTTCCTCAAAACCAAAACGAGTAGATTGGGACAAGCTGGAAGCTCAAGTTAAGAAAGAGGAGAAGGAAGAAAAGCTCGATGGTGAT GCAGCATTGAACAAATTTTTCCGTGAGATATATCAAGATGCAGATGAGGACACAAGAAAAGCTATGAAAAAGTCATTTGTGGAGTCTAATGGAACAGTTC TGTCTACAAACTGGAAAGAAGTTGGATCAAAGAAGGTAGAGGGAAGTCCACCCGACGGTATGGAGTTGAAGAAATGGGAACATTAAGCTGTTTTCTTTAT CAATATTTTGTAATCTGTATCCATCCTTTTGTGGTTAGATACCTGCTCTGAAGTCTGAACAAATGGAGATATTTGACTGCTTTAATTGGTATTGGTTTTC TTGGGTTATGGCTTGGCTAAGACCTTGAGAGTTGGTGCTACAGTTTTTCTGTGTTGTGAATGTAATGCAGTTCTAGTTTCTCTGTTTATTTATATTCATT CAGGCCACCATAGTTCTGTTTTTCTTTCCATCATATCTTGATATCTATTCTATTAGGACTTGCAACACATAATTATCTTTCATAGGATTTTTGTATAAGG TTTCATTTCATTATACAAAAGTCCTATGAAAACCTGATACAAATTCTCATAATTCTTCTCTGAGATATTTAAGAATTTGAGGAGGATGATGATCATTTTG TTGTTGATTTTCTTTTGAAATATTTTTCCATTTTTAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_43986; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_16821
| Blastp | Protein SGT1 homolog B from Arabidopsis with 63.33% of identity |
|---|---|
| Blastx | Protein SGT1 homolog from Oryza sativa with 65.11% of identity |
| Eggnog | Suppressor of g2 allele of skp1(COG5091) |
| Kegg | Link to kegg annotations (AT4G11260) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452779.1) |
| Pfam | Tetratricopeptide repeat (PF13432.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |