Id Trinity | FTRINITY_DN54592_c6_g1_i1 |
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Name Transcript | Ll_transcript_17743 |
Sequence | CCAACACAGAAAATAACAAAAATATAAAGTCTTCCCAAACAATTTCCATTTTTCAACCAACACTAATAAACACCTTCTTTTCAATTTCGCACCAATATTC CTAATTTCCATTCCTCACTTTTTGAAGATTCAAGTTTCTTTTGAATCATTTGTGATGGAAGATGCATTGGATCATTCCACTAGCCTATGCACTCACTGTG ATCGGGCTATCCCGGACGCGAATATCGATTTGCATTATGCTCATTGCTCCCGGAACCTTGAAAAATGCAAAATTTGTGGTGATATGGTTCCTAAAAGACA TGCTGATGATCACTATTTAAGCACTCATGCACCGGTTTCCTGTTCATTGTGCAGTGAGACGATGGAGCGTGATATTTTGGACATCCATAGAGGTGAAAAT TGCCCTCGAAGGATTATCACTTGTGAGTTCTGTGAGTTCCCATTGCCAGCAATTGATCTGGCTGAGCATCAGGAAGTATGCGGGAACCGGACAGAACTTT GTCACCTTTGTCACAAATATGTTAGACTCCGTGAAAGATACACCCATGAAGTTGTGTGCAGTGGTAACCAAGATCGTGCTGTGGAGTCTTCAAGGAATGT GAGGGAAGCTGAAAGAGAGGAAGGTGCTCGGAGAAGGCGTCCGAATAACATCTCAACAAGACGTCTTCTTTTCACAATAGCAATCACTGGCATTGCTGTT ATATTGGGATCTTTCTTTTTTACCAAGGAAAACAGAGCCCAGTGATGTGCATTAGCAACTGAGGAAAACATGTTAGGATACTGTACATCTGCTTTATTTG TATACTCTGCGACAAAATTTCTTTGAGATATACTTTCGCCAGTGTATCAAAACACATCGAATTGTCATCATTTATAACATATTTTGCTAGTTCTGCATTT CATGGTGAGAATTCTCAAGCACCAGGGTATATTTTGAGCCTTTTCTGATGAGATTGCACTTGTTAATCTTGCAGTTTTACAGATAATGGAACAACTTCTT TCCCTTTACATTAATTCAGTATATACTAGTTGCCAAATGCCAATGACTGCATGAGTTTAATCCATTATATTATATAATCTGAAGCTTAATTTGCATAATC TTTGAATTTTGCATAGATTATTTATGTTTCTTTTTATTTCTTCTGAGATGGTATATCTCAATAGTTGAAAAATCACTAGTGACCTGCAAGTTCCTTTTGA AGGCAAAGAAAATTATAAAACATTCTGAATTTTCTTCAGATTCTT BLAST |
Tissue | flowers |
Gene name | LI_gene_44014; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_17743
Blastp | TRAF-type zinc finger domain-containing protein 1 from Mus with 36.64% of identity |
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Blastx | TRAF-type zinc finger domain-containing protein 1 from Mus with 36.64% of identity |
Eggnog | TRAF-type zinc finger domain containing 1(ENOG4111IF3) |
Kegg | Link to kegg annotations (231712) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (NP_001242241.2) |
Pfam | TRAF-type zinc finger (PF02176.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |