| Id Trinity | FTRINITY_DN54606_c0_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_748 |
| Sequence | CAAAAGAGGCCAAGTTCAAGAAAAAGCATGTCATTCTTGTGGGAAAGAGAAAATCTAAGGTTGCCATTTTTTTTCTTTTTATCTTTATTTCTGCTCTGAC ATAATATCTTTTTATGATAGAAGTTTAGAATGAATTAAGCTGGGGTTAACAACTTAACATAAGGATATTCACCTCCAAATCTGGTATGCACTTATATGTA ATTCATTACAATTTTACGTCCCATTTAAATGAATATATTTGATGTCAAAACCTGCATCTAGTAAAAACGTAACAAAAATATCTTGTAACTCTTAGTAAAG TTATACTGTATGAAAACTTACTCATGTAATTTATCCCTGTGCCAAATTAACACACATATATTTGTGGTTATTGTGATGTATGAAAATAAAGATAGAATAT GGAATATTGCCCTTATTATATATATATAAGTAAATGTTGTCTCTAAATAGTTACGCAAATGCATGTGCTTTTCTTATCCTGATGCAGTTGAAGATAGTAG ATATGAAGAGTGAAAAATAAAGTGTGTGTGTGTGTGGAATAAGCATGGGAAGAGGGAGAGTTATTGTGGAGAGAATAGAGAACAAGATCAGTCGTCAGGT AACATTCTCAAAGAGAAGGAGTGGTTTGTTGAAGAAAGCTTTTGAGCTATCTGTGCTATGCGATGCTGAAATTGCTCTTATCATCTTCTCTAGTCGTGGC AAGCTTTTCCAGTTCAGCACTTCTGACATTAACAAAATCATTGAGAAGTATCGTCAATGTTGCTTCAACATGTCACAGACTGGAGATTTAGTTGAACATC AATCATCACAGAACCTATACGAGGAGGTTTTGAAATTAAGAGCCAAGCATGAATCTCTTGAGAAGACACAAAGGATTTTTGAAGGAGAAGATCTAGGGCC ACTTAGCATGAAAGAATTGCAGAGTCTTGAGAAACAAATTGACAGAACGCTCTCACAAGCACGACAACACCATATGCAAAAGCTGACTGCACGAATTGAT GAGTTACGCCAACAGGTATATATGCAACCATTAAAAACTAAAAATACTATGAAAGTGTTGTATGTACTGTTGGATTTTGATCCATGTGAAATTATAGGGT GAAAGAAAAATCTAACAAAGCCAAAACATAGAGAATTATATCCACTACTAGCACTCTTAAAATTTACCTTACTATAAGAAAAATGTACTTCGCTGGTTTG CTTATTGAGAAATCATATGATGACTAGTGAATAATGATTATCAGTTCTCATTATCTACGTACATGACTAGATATATATTTTGGCAGGTTCAGAATCTGGA GGGGGTTAACAAACAATTGGAAGCCAAGGTTTTCCGATCCCTTTTAATTATTATATGTCAATATATGTATAGTTGAGGAATTAATGCTATAAAAACTTCA AATAATTTACGGGCTCATACATAGTCTATCATTTATACTCATTTTCAAACATTTGCTCCAGGAAACGGATAAACTCACCCACACCATTGGGGAAGTTTCT AATAACTCGACCACGTCGGTTTGCAGTTACAACGATATTAGGTTGCATGATGTACAACCCAAACACTTTGAATCTGGGACAGCCTTACAAACATGGTGTG CACTTTATTATAATTTTTAGTCTTTTTATTTTACTTTAATTTATAAATATGTAGATGCATTATTCTCCTGGCTAAATTTAACTTGGTTTCTGCAACACCA CATATAGTCCATTGCAATGTCTTGACTGCAGTTTTAAGTTTTGGCAATTGCATGTCTTGAAGAATATGTGTACATAGAGTATGCAGTCAACTATAAATAA ATGTGTTATTGTCTATTTTTTGGTATAATATTATCTATTCAGATTGTTATTTTAATGACACAAATTTATTTCTTAATTATACCTAATAAGCTAGTGTCTA TATAAGCTTTGTCATGTGACCTACCCGGTGCTGATGGCCATATTCACATGCATCTTGTTAATATGAATATGGTAATGGATTTTTTAAGCAGAAAACTATT TTATTAATAAGAGAGAGACGTTTGATAACACTCATCTCAACTAAGTCAATCACCATATTTTGCAAAGAGTGGCCTAAGAAGAAAGAACTAATAGATAGCA GGTTAGTATTGTTGGAAAGTAAGTTTTACATCGCCTATCTCATCATTGTCTTGAGAATAGTTTAAATATCTGTTAAACTACTTCTTTCATTACCAATTGA TTCTGAGAATAGAATACGATGATAGCACGTTTGGTAACATGCATCTATCTCAACTTGTTTGTTTGTTTTATTTAAATAAATTGTTGTTGCAGTTGGTTTG GGCATAATCATCAGCAAGCTGGTTCAAATGTAAGCAGGAGTGACACAAGGAGCGAGCTAGGCCAAAGCAGTCATAACAATAACAATAACAATGGATGGCT GCTTTGAATAATATTCATGTTAATTACAAATAATCAAACAAAAAATGTTCATGTTATTATTGCTTGTTATGTGTATCAACTAAATTATAAACTTGTACCA GTAAGTCTCATAAAAATATCTATAATTGATGGATTCCATTGCAATGTAGCCAGCCCAAAATTAAATTATATGTTTATGTAGACAATATAGCAATTCCAAA AACAAAAACTATTGCCATGTACCCTTATAACTAATCATTTAAGTTTGATTTTACCACAGGGTTCTAAAATTGATTATTGATTGAACAATGGATAATTAAT GTATGATTTCAATTTGAATATTTAAAATGTATTTAAAATGGGGCATGCGGTGCAATGAGAGTTGAGAAATAGATAAGCTTTATAAGAGGGTGAAATTGAT GATTAATGATTAATTAATTGGTGAATGGAATCTCTCTCCTTCCATGCCTGCATAGTAATAATAGTGATAAAGTAAAGATCTGATTTTGCATTACTCATCC TCTTTCTTTCAAACCAAATCCATCCTCCATGGCAAATATTACCCCCTCAGGTTTCTTCATCTTTCATTTCTTCATTCTTTTTCTTATTTCTCACCTAAAT ATCGGGTCTTTCATGTGTTTCATATCTTGGTTTCTCACTCTTTTACTTTTTTTCTCACTTGTTTCCATGTTAAGAGGTATTCCATGATTGCATGCACATG AATAAAACCATGATTCAGTTCAATGAAAATCATGTCATGTCTAGGATCTCAGGTTACCTTTTCCTTTGGACATCTAATGCACTTCAAGGCTCTTCTTCTG CAAATATTTGAATGCAAAATACCATCTTATATTTATAATCGACTTTTACTTTCACTCAAACATGTTATATTAATTTATGATATCAATTTTACATATCTGA ACTGTTTCTTCCTTTTCTTACCAATTACAAGAAGGGATCTTTCATGGTATTTCACATATAAACACAGTAATGGAAATCATCCTATCATGAACATTAAATT TTCACCTGTTATAGTATCTTGAAATATCCCCTTTTTATAAAATAAAAATTGCAATTAGATTGCTGGCAGTGAAGTTTTCTGAACCATGATTCATGCTTGC ATCAAACTGATGTGTTTGTGCAGGTAAATATGATAATGGCACAAAAGGAGAAAGCAAAGAAACAAGCGCACTGGTTGTTTCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_44171; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_748
| Blastp | MADS-box transcription factor 6 from Oryza sativa with 59.24% of identity |
|---|---|
| Blastx | MADS-box transcription factor 6 from Oryza sativa with 60% of identity |
| Eggnog | Transcription factor(COG5068) |
| Kegg | Link to kegg annotations (4330328) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442168.1) |
| Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) (PF00319.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |