| Id Trinity | FTRINITY_DN54612_c3_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_473 |
| Sequence | AAACATTGAAACGAGGTCGTATAAGATGGTGTTAGTCACATTTCATTATTAATATATCGAGAGTGAAGAAACACAATCGGAAAATCCTAAATAAAGTGCT TTTCTTTTTTTCATTCTATTGATAAAAAACCTAAACTCAACTCAGCACAACACAACACAACTCACATTTTGAAAAGCAATTAATCGAAACGCAGAAGATG GAGATGACGTCACCTTCTTCTTCATCGAAAGCGTTATCAATAACACCAGGTTGTAGGGTTTTGAGTGATCAACATATATGGAAGCGACTCCAAGATGCTG GATTCGATGAGGAATCGATTAAGCTCAAAGACAAAGCTGCTCTTGTTTCCTACATCTCTAACCTCGAAGCTCAGATATATGACCACCAGCACCACATGGG CCTTCTCATATTGGAGAAAAGGGAATTGACTTCCAAGTATGAGCAAGTTAAGGCCTTGTCTGAATCATCTGAGCTAATGCAGAAACATGATTCAGCCATG AACAAATCTTCATTAACTGAAGCAAAGAAACGGGAAGAAAGTTTGAAGAAGACAGTGGGGGTCAAAGAAGCATGTATTGCAAGTCTTGAGAGGGCCTTGA ATGAGATGCGCTCTGAATGTGCTGAAACAAAATTTGCAGCTGAGAGTAAACTTGCTGAAGCACATCAATTGATTGATGAAGCACATAAAAAATTTACAGA GGCTGAGGCTAGGGTGCATGCAGCAGAATCTTTGCAAGCAGAGGCTAACCGATATAACAGTATTGCGGAAAGGAAGCTTCACGATGTTGAAGCACGTGAA GATAACCTCAGGCGGAAGATCATGTCTTTCAAGTCAGATTGTGATGAAAAGGACAAGGAGATTATTCTGGAATTGCAATCTCTTTCTGAAAGGCAAAAAG GTTTACAGCAAGAACAGGAAAGGTTACTTCAGTCTCAAGCCCTGCTCAATCAGAGAGAGGATCTTCTTTTTAGTAGATCTCAGGAACTAAATCGTCTTGA AAAGGAGTTAGAAGACACAAAAGTGAAAATTGAAAAGGAACTTGATGCCCAGCATTATGAGAAAACCAATCTGAAAGTGACTGAAGCCACCCTAACACAA AAACAAGAGGCACTCACTAAACGGGAAGCTGAGCTGAACAAGAAAGAGAAAGAGTTGCTTGAGTTTCAAGTGAAACTTGCTTGTAGAGAATCTGATGAAA TTCACAAAGTTATAAATGACCAGGAAGCTGCATTGAGGACTAGAAAATATGATTTGGAAGCTGAGTTACAAATGCAGCGCAAACTGGTTGAAAATGAAAT TGAGACAAAAAGACGAGCTTGGGAGTTGAAGGAGGTTGATCTTAAACAACGGGAGGATCAAATCCTGGAAAGGGAGCATGAGTTGGATGTCCTGTCAAGG TCACTGACTGAGAAGGAGAAGGATCTGGTGGATATATCAAGTGCTCTCGAAGAAAAAGAACAAAGATTGAGAGCTGCTGAGGAGGAGCTTGAGTTAAATA AATCCCTTTTGCAAAAGGAGAAAGATGAGATTGAACAAACAAAACAAGATCTGCAGAAGTCTATGTTATCTTTGGAGAATAAACTACAGATAGTTGATAA TGCAAAGGAGAAACTGGAGACCATGAAAAGTGAAACAGGTGACCTGTCAATTTTAGAAGTGAAGCTAAAGGAAGAGATTGACCTTGTAAGGTCTCAGAAG CTGGAGCTTTTGGCCGAAGCAGATAAGCTAGAAGCCGAAAAGGCAAAGTTTGAAGCTGAGTGGGAACTTCTTGACGAAAAAAAGGAAGAGTTGCAGAAAG AAGCAGAACTCATAGCAGAGGAAAGGAATGCAATATCCATTTTTATGAAGAATGAGCGTGATAGGCTTAGAGAAGAGAAGGAAAATGTGCGTAATCAATA CACCCAAGACATGGAGTTGCTTGCCAGCGAACGAGAAAAGTTCATGAACAAGATGGCCCATGAACATTCTGAGTGGTTTGGCAAGATGCAGCAAGAGCGA GCAGATTTCTTGCGGGACATTGAGATACAAAAGAGGGAGTTAAATAACCTTGTTGACAAGAGGCGTGAAGAAGTGGAAAGTTATTTGAAGGAAAGTGAAA AGGCTTTTGAGGAAGAAAAGAACAATGAACTTCAATATATCAATGCCCTTAAGGAAAAAGCAGAGAAAGAGTTGGAACAGGTTTCCTCTGAGATGGAAAG GCTTCAAACTGAGCGGTCAGAGATAAATTTGGACCGTGAACAGAGAAATAAGGAATGGGCTGAAATAACTAAGTGCATTGAGGAACTTGAAGTTCAAAGG GATAAGCTACAAAAACAGAGAGAACTTTTGCATGCGGATAGAATCAAAATTCATGCTCAGACTGAAGAATTGAAAAAGTTAGAGGATTTGAAAGTTGTCT CAGATGACATTGCTATCACTAGAATGCTTAAATCTGATATGGAGTCTAACCAACAAAAAATCTCTGCTTGGAGAAACTTGAAGCATCAGACTTTTACACA TGGTGGTTGCCTGAATGCATGTGAGGAAATAGATGCAGGTAACATGGGAAATGGTTTTGGTACTCCTTTTGTGCAGAAGTCATCCAGTCTTTCTCCTCCT AGTCCTGTTCGATTCTCATGGATCAAACGATGCACAGAACTAATATTCAGAAATTCTCCTGAGAAGCTACTCATGGAAAAAGATGATTTGCATTTGGTTT CTGGTACTGGTAACATTAGCAATGGGCAAAAGCACTTGGAAAATGACAAACTTTCACTTGGGGAACCAAAAGTAATAGTTGAAGTACCGGCTCGAAATGA AGATGTCAGCAGAACAAGCGAGTTCGAATCTGAGACTAAAAATGCGAATGGAGCAAGTGCACTCTCGTATACGTATGAACATCAAGTGGGGATACGGAAA AGAGGAAGTGAGAACATTAGTAATGAAGTTGGTGATCCACGTATAGATCTGGGCCAGAATAAGAAACAGAGAGCAGAAGGGCAAACCACCAAAAAACTGT TGGATACAACAGAGACCCAGCATTTATTGATGACATCAAATCAAACACAAGGGAGCATTGAAGAAACTCACGAAGTAATAGTGGATAAGGTTATTCATCT ATCAGAAGTGACTTCAGAGAAATTTGATGCTCTCACTTCCACTATGCCTAATCAAGAGCTGAGAGATAATTTGCAGAATGCTACACTAAGAGTGGATAAG CTTCATGGAGAAACAAATGATCAATCTAATTCTAAAACTATTCAGGAAAATATTTTACCATGTGGCTCCGAAGTAGATGGAAAAAAAGAGGAAACATGCA AAGAAAATAATGGACATGTTCCGGAGCAGTGTTAGGTAGTTAGGTCTTAAAAACTTATACTGCTTCCTTTTGTTTCTTTTATTTGTTACGTTCCGATATC AGATGCTTATGCAGGTAGTGTTTGGCTATAAACAGGGACTGCGGTTGGTATATGATGATTAGTGTGTTTGGTTAAAGTGTATATTAGGAGTGAATGAGGT GTGTCTATACTATACTTAAACATATCTAGTTTTGCATTCTTCTCATTGATATCTCTCTTGTTCACCTAACAGATAATATAGTTGCATTTTTAAATATATT ATGTTGATTTGATTTGTTCTCCTCTTGCATTGCAGGATCCTAACACAGTTTGGAGGGACTGTTCCTTTGTAAAGTTGATTGATTGATTACTTGGAGATGT CTGCTGTGCTGTGTGTACACATTCATTATATGGATGCATTTGCAAAATAGTGAGGTAGTGAATGTTCTGTTCATATAATAGGGTTCATAAAATAGGTATG TTTTGTACTCCGAGAGGAGTCACTAAAAAAAGGAGATAAATGGTATGTGCTTTTTAGCTTTTGTAAAATCTGGCAGTGTTTGCTAGCAAAACTTTGCAAA GTTGGTTTTCTGACTTAGTGGTTTTTCTTTAATTTGTGACATTGATGGTTCATCATTATTAGTGCTATTGAGATGTTTGTGTTAAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_44220; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_473
| Blastp | Protein CROWDED NUCLEI 4 from Arabidopsis with 46.77% of identity |
|---|---|
| Blastx | Protein CROWDED NUCLEI 4 from Arabidopsis with 46.53% of identity |
| Eggnog | nuclear matrix constituent protein 1-like(ENOG410YA8H) |
| Kegg | Link to kegg annotations (AT5G65770) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421667.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |