| Id Trinity | FTRINITY_DN54614_c0_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_960 |
| Sequence | CCACATTTAAGATGAGGTTGGAACCTCTTTCATTTCTCACTCTCTATCCTCCTAGCGGCTAGGGTTTTTCACACCAATCCATTCTCCTTCTATTTTCTCT TCTTCTCTTCCCATTTTCAATAATCCATAAACCCATCTTTGTTTTTCGATGGAGTTTTTGTTGATATAGTAATCTTTCTGAACCGTTTTTTGAAACTGGG TTTGTGATATTTTTCTGAGCAACTTTCTGAAATGACGACAGTGAACCCATTTGATTTGTTGGGTGATGATGCTGAAGACCCATCTCATCAGATCGAAGCA GAGCAGCTTAAGGCTGCGGCCGCAGCCGCCGCTGCTCCTAAAAAGGGTCAGCAGCCGCAAGGCAAGGCTGCTCAGCTGCCAACGAAGCCTCCTCCTCCGG CTCAGGCTGTGAGGGAGGCCAGAGCTGAACCATACCGTGGAGGCCGTGGAGGTGGACGAGGAGGAGGTGGACGTGGATATGGACGTGGTCGTGGTGGTTT TAGCCGTGACTCTACCAATGATGAGAACACCTTCGGTGTTACTGAAGCTAATAAAGGTGCTTTTGGAGGAGATGCTGAGAAGCCCTCTGAAAGACAAGGT TATGGTGCACCACGTACTCCTTACCGTGTTGGCGGTCGACGTGGAGGTTTCAGCAATGGTGAAGGTGATGAAGAAGGGAGGCCAAGAAGAGTATTTGAGC GTCGTAGTGGGACAGGACGCGGGTGATGTTACTGCTAACAATGATTTCTTTCACTAACTTGTGTTTCTAATTCTAATCAATACTGATGCCACTTGTTATG TTTACAGTAATGAATTCAAACGTGAAGGTTCTGGGCGAGGTAACTGGGGAACACAATCTGATGAAATTGCTCAGGTGTCTGATGAAGTCGCAAATGAAAC TGAAAAGAATTTGGGAGATGAAAAGCCTGCTGTCAAAGAAGATGCTGCCGGAGATGCAAACAAGGAGAGTCCTGCTAACGAAGCTGAAGAAAAAGAGCCT GAGGATAAGGAAATGACTCTGGAGGAATATGAGAAAGTGTTGGAGGAGAAAAGGAAGGCCCTGCAAGCACTGAAGACTGAACAGAGGAAGGTAGACACTA AAGAGTTTGAATCCATGCAGCCCCTGGCAAGCAAGAAAGACAATCATGAAATCTTCGCTAAATTGGTGAGCTTATTTCTCGCGCATATTCCCTTATCATA TTTGTTGTGTTGCTGATGCCTATGAATATTTTTTGCCGCTTTTAACTTTTTATAGGGATCTGATAAGGATAAGCGCAAAGAGGCTCTTGAGAAGGAAGAG AAATCTAAGAAGGTGTGTCTTTATCAAACTTGTCCATTCTTGTTATTTTGTACTTGAAGTTTCGTAATTGCCACAATCTTGTGCTTGATTATCAAAGTTA TTTATTTTTATTCTTCAATTTCAAAATTATTAATGGCTTTATTTGTTTCCTTTTTCCTTGCTAGCTTAGGCTCCTTGATATAATTCACTTTTCTGTTTTA TCCCTGTTTGTTCATCCTCAAATTCCTCTCTGATTTTCTTGTAATTGTTGTGGGAGTATGCCAATAATTGTGACATTGAAGTGGTTCTTAAGCCAATTAT CGAACTCTATTTCTGTTTATTTTTAAAATGAGTTTTTTTTTTTACAATCATATAATGAATTTTCTTTTCATGTGATGGTTTTTAATACTTAGGAACTGGT TTTCCATGTAATTTAGCTTGATGCTTGATGTTTTCTTTGATATAATCACTTCACTGTGGAGTTATTTATTACTTGTGGTATCAATACTTAGGAATATCTT TTTTGTTGATATTGTCTCTGTTGATTTTGCTATCCACATCGGCGTCTCGTTTATATTATTTACCTTTTGCCACTATCTGATCTTTAAACATCCAGCGCCC TAAGTTATGTATCTGACTCAAACTTAGGTATACTTAAAAATTGTTTTTGTTTTAAGATGCCTAATTATAGGGATATGAAGAAATTGTTGCCTTCTTTATT ATTGAAGAATTTTTAATCTATCATTTACATGCAATGGGTTATGAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_44242; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_960
| Blastp | RGG repeats nuclear RNA binding protein B from Arabidopsis with 43.45% of identity |
|---|---|
| Blastx | RGG repeats nuclear RNA binding protein A from Arabidopsis with 58.2% of identity |
| Eggnog | SERPINE1 mRNA binding protein 1(ENOG410YBHR) |
| Kegg | Link to kegg annotations (AT4G17520) |
| CantataDB | Link to cantataDB annotations (CNT0001522) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452182.1) |
| Pfam | Stm1 (PF09598.9) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |