Id Trinity | FTRINITY_DN54616_c8_g1_i2 |
---|---|
Name Transcript | Ll_transcript_1487 |
Sequence | GTTATATAAAATAGAGGAAGAGAACAAAGAAAAAGACAGAAAGTGCACTTCAGAACAGGCCAGCATTTTGGCTTGTCTTTTGGTCTTATACGTGTGAGCT TCAAAGGTATCATCTGATCTGTTATCTCATCCACACTCTTCTCACTGTAGCTCCCTCTTCTCTCTTTCCATCACACAGAAAAATCCTGAAATTTCATCAA CTAGTTTGGAAATTTACTGTGCTAGCTAGTTAGTTGAAGCACAACTTGTAGTGCTAAAAGACCTAAAGAAGTCAATCCATCTCGCTTTCGAATCCATTCT CCTTTTCATTCATTCTTTCTTGCCTGTGTTCTCAAGACTTAGAAGGTTGGAGAATAGAGAAAGGTGCACATAATGAAGCAAGATCTATGACTTGAAGAGA TCAGATCCACTGTGAGCTACCTATATATTATTAGGTTTAGCCCTCAGATCTCAGAAATCATTGTCCATAAAGTTGTGCATGTGTAATATCTTAGAGGTAT ATATAGTTTGTTTTCACATCTAACTTAACCTACAAAGAGATGGAGAAAGGTTTGGTGGTAGATGAAAACATGTCCAATTTGACATCCGCATCAAGTGAAA TAAGTGCTTCTTCTGGAGCCAGGAGTAACACAGTCTCTTTCTATCCTCAATACTCCTCTACTTCAACACATCAAGAACCAATACTCAAAAAGAAGAGAAA TCTTCCCGGCCACCCAGACCCTGAGGCTGAAGTGATAGCCTTGAGTCCCAAGTCTCTCATTGCAACAAACCGGTTTGTATGTGAGATTTGCAACAAAGGG TTTCAAAGAGATCAGAATCTGCAGCTTCATAAAAGAGGTCATAATTTGCCATGGAAGCTAAAGCAAAGAAATAGCAAAGAACCATTGAGAAAGAAAGCAT ATGTGTGCCCAGAACCATCTTGTGTTCACCATGACCCATCAAGAGCCCTTGGAGACCTCACTGGAATCAAGAAACACTTTTTCAGGAAACATGGGGAGAA GAACTGGAAATGTGAGAAGTGTTCTAAGCGTTATGCAGTTCAATCGGATTGGAAAGCTCACTCCAAAATTTGTGGCACCAGAGAGTACAAATGTGATTGT GGAACCCTTTTCTCTAGGAGAGACAGTTTTATTACTCACAGAGCCTTTTGTGATGCTTTAGCACAGGAGAGTGCTATAGCAAATGTCACAACAATGAACC CTCTTATGTCCTCTCACACTCAACTTTACAACCATAGCTTTCAAGCACTATCACTTGTGAAAAGAGAACAAGAGTTCAATAACTTAAGACCAGAAATTCC ACCATGGTTAGGAGGAGAAGGTTTTCATGGTCAAACTCTCAGGCCTTTAGATTTTTCATCAGCTCCATTACTCCCTACACATTATGAAAACCCTAACCCT ACAACTTTTCTTCCTCCTTTCCAATCTAATATTGAATCTTTTTCTTCTTCTCCTCACATGTCTGCCACTGCTTTGTTGCAAAAGGCATCACAAATGGGTG TAACAGTAAGCAAAACTGCACCTTCTACAGCAACTCTTAGACCACATTTATTGCAGCAGGGTCACGTGCCTGAATGTACAACAATAACAGGTTATAATAG CTCCTCTTCTATGCCTTCATCTTCACCTCTTTCTGGCTCAATGGTTATTATGCCTTCACGTGAAGAGATAAGGACTGTTTTCTCTTATGGGAATAAAGCT GCAATTACCTCTGCCAATAATACTATAGGAACCGATCAAGAATATTCTTTTTTCCATGATATGATGGGTGGTGGTGGTAGTAATAGTGGCACTGTTCATA ATGCTAGTGGGTTTGAGAGCTCATCGTTCGAGGAAGCTATGAGAGGAATGTTTAATAATCCACCAAGAGATGATGATAAAAACTTTCAGGAACTTGTTTC AAAATCAGCACAATCCCAGATTGGTAATAAAAGCAACAAGGGTGCTAATGATGAAATAACTAGAGATTTTCTAGGTGTTGGAGCATTTTCTCAAAGAGGT TTCTTCAATATATCTGGACTTGATCATTTGGATTCTTCATCATATGGGAAGCAAAATCAAAATCAAGCACCTTGGCAAGGCTAAGTTGTAGGTTTGTACA TGACTTGAATGCATAAATTTTTATGTGGCTGATGAGTTTAAGAGGCTTCAAATGAATCTACATTAGCTTACTCCCTAGTATAGTTGACATTGGTTCAGTT GTATGGACATTGAATAGTGCTTTAAGGTACACTTCTTGCCTCAACAATATTTAAGCTCAAGTTTGTTTTATAAATAAAAAAATTGTATTAATTAAAATGA GCAGAATGGTACCCACCTAATATAAAAGAGATCAAGAAGTCAAAAGATATAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_44276; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_1487
Blastp | Protein indeterminate-domain 7 from Arabidopsis with 55.62% of identity |
---|---|
Blastx | Protein indeterminate-domain 7 from Arabidopsis with 58.94% of identity |
Eggnog | Zinc finger protein(COG5048) |
Kegg | Link to kegg annotations (AT1G55110) |
CantataDB | Link to cantataDB annotations (CNT0000237) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458210.1) |
Pfam | Zinc finger, C2H2 type (PF00096.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |