Id Trinity | FTRINITY_DN54626_c1_g1_i1 |
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Name Transcript | Ll_transcript_1735 |
Sequence | TGTTCGTGTGTCATGCTTTGTTCCTTGTTCGTGTGTCATGCTTTGTTCCTTGTTCGTGTGTCATGCTTTGTTCAAAATGAAATGTTTCTGATGTTAACAA TACAAAACAGTTTCAAGCTGTGAGCTTTTGAAGAGAATTGAATTGGGTGAATGGGGGGTGAAGATAAGAGAAGGAGAGTGGTATTTGTGACAGTTGGGAC GACTCGTTTTGATGCTCTCGTTAGATCTGTAGATTCTGAAATTGTTAAACAGGAATTGTTCGCAAAAGGGTATACTCATCTTCTCATTCAATTGGGTCGT GGATCATATCTTCCTTCTAAGTGTGAGGGAGATGATGGTTCTTTGGGTGTAGATTATTTCACTTTTTCATCCACTATTGCTGAAAATCTCAGATCAGCTT CTCTTGTCATCAGCCACGCAGGTATGCTTCTTGCACCTTATCTTTTCTAGGCTTCTTCATTAGTTATGTAGTTACTGAATATAGACAATGCAGTTCTCCT TATCGTGATCCATGTTGACAGTGTCTTGTTAAAATTATGTATGCCATGTTTGGTTTATGTGTTATGTAAAAATGATTTTAAGACTCTAGCATGGAATTTT GACACATTGGAAAATTAAAGAGTGGAGCATAAAAAATGTGCACAATGCACGAGTTCCCACTCAGTGAGGTGTGGGGAGAGTAGATGTGTACAACCTTACC CTCGCAAACAGAGAGGTTGTTTCCAAGTATTATAAAGAGTTGAGCATAATTGGTATTATTGTTTAAGATTCTATGTATTTTGCTTTATCATTCATTCCCT TCTCCGAAAAAATGAAGGGGAAATGGTTGCTGAGTTGTGATAACACCAAAAATGTGAGTGAATCCTTTCATATGGTGATGCATGTGGACTTCTTATCCAG TACCTTCACTTATCAGCACATAATTCAATCTCAGTCTTTTCCTTCATCAGTTACAAGCTTTATAAACCATGTGACAAGTTTAAGAACGAATGAAGTCGAT TTGTTGTATATTATATTCAAAATGGATTTTGAGATGAGGTTTGTGGGGAGACTTATTCCATTCTAAACCAGGTAGGAACAAATGTTATTCCATAAAACTT CCAATAGCATTTTGTTGATAATATCTCGTGGGAAACAATAAATTGCAAAGAAATACTTGAATTCAATGCTTCTTATGGATAGTTGTAGTTTGATTTAAGC TGGGAGGAAACCAGAAGGGGTAAAAATGCACGAGAAAATGAAAATACAAGCCAAATCTGATGATATTTGGAGGTATAGGCAAGTAACTCTGATTATTTTA CTTTATGCAGGGTCAGGTAGCATATTTGAGACATTGAAGGTGGGTAAACCATTAATTGTGGTTGTAAATGAAGATTTAATGGATAACCATCAGAGTGAGC TTGCAGAAGAACTTGCAGAACGAAAGCATCTGTATTATGCTAGCCCTCAAACACTCCATCAAACTATATCAGATATGAATTTAGAGTCTCTCATTCGATA CTCTCCAGGTGATGCTACACCAGTGGCCAAGCATATAGACAGATTCCTTGGTTTTCCTGATGATTGATCTAAACCCTTATTTTTTATTTCTTGGGTTAAA TGTTTCTATGAGACAATAAATGATTTCAGTAATATTTGGATGCTCCAAATAATTTGTAAGTGTCATTGCATTATGGGTTGTCATATTTGTGATCTAATAG TTGAAGATTTTGTATCCAGTTGTTTAAGGAACTCTTGCACTTACATATTAAACGTTAAACTTTTGCAGCTAATCAGGAATCATGTCTAGACATGTTAGCT TCAGCTCATGTCCTGTTCTCTCTACCCATTTTTACTTGAGCAATTAACCAAGAAAGGATTCTCTAACTTGGTTTGATGAAATGCAAC BLAST |
Tissue | flowers |
Gene name | LI_gene_44374; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_1735
Blastp | UDP-N-acetylglucosamine transferase subunit ALG13 homolog from Rattus with 38.1% of identity |
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Blastx | UDP-N-acetylglucosamine transferase subunit ALG13 homolog from Rattus with 35% of identity |
Eggnog | glycosyltransferase(COG5017) |
Kegg | Link to kegg annotations (300284) |
CantataDB | Link to cantataDB annotations (CNT0000591) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019445863.1) |
Pfam | Glycosyltransferase family 28 C-terminal domain (PF04101.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |