| Id Trinity | FTRINITY_DN54630_c1_g2_i9 |
|---|---|
| Name Transcript | Ll_transcript_1568 |
| Sequence | CAATAATTAAATCGTATGTCAATTAAATCGGATATACTTACTTATATATATATATAAATCTAAACTAAAAAAATTCAAATAAGTAACTATTCAGATTTAT AATTTAAATTCATAATCTAGTCCAATAAATTCACGTAAACAAACATCCTTGAATTTTTAACAAGTTCAAAATCTACAATTCACAACATATATCAATCTAA AAAAGCACAGAAGATAATGAAATATGCACGAATGGAATGAAAGGAGAATGTGTTAAAATAGGTGTGGGAGGCATGATATGATATTTAAAATGAAAAGAGG CAAATGTGTTTATGGACTTTAGAGCAGATGAAGGCCCAAGGCGTGTGTGAGTTGTATATTATAGATTATTATTATTATTATTATTGATTTTGATTGCAGT AGTGAAGTGAGGTTGGGATGTCGGAAAGAGGTGTTGAAGTTCGATGCCAGAGAATTGGGTGCGATGCTTTCTTCTCCGAACACGATAATCCCGATGCTTC CTGTCAATATCATCCTTCCGTAACTTCCTTTCTCTCTTTTCTTTCTTTCTTTCTTTCTTCTCTTTCTCTCTTTTCTTTTTTATGACCTAACAACTTATTC CATTTCACTCTTTCACTTCGATCTAATGCCGCCGCCTCATCTTCCTTTCTTCAGGGAGTAAGTCCATGCTTCTTTCTTTACTTCATCACTTTTTTCTTTC TTTCCTATCAATATTTCATCTTTTTCAATTAACTATCTTCCCCTTTTAATTCCCAGCCTATATTTCATGACGGGATGAAAGAATGGAGTTGTTGCAAGAA AAGAAGTCATGATTTTAGCCTCTTCTTACAAATTCCAGGATGTAAGACAGGGAAGCATACATCAGAGAAGCAAGTAATTGCACCCGTTAAGAAGAATACT GTGCCTGCTCCAGCTGCAGCTTCTTTAACCAATGCATCATCAACGGATTCTTGTTCTAGGTGTCGGCAGGGTTTCTTCTGCTCAGACCATGGCTCACAAG GCAAATTGGTAGAAAAACCTGTAAATGTTGCTGGAGATGCCACTTCTGAAAACAAAATCTTTGTGGCTCCTAAACCTCCAAAGAAGATAGTTGATATAAA TGAGCCTCAAATATGCAGAAATCAAGGATGCGGCCAAACTTTTAAGGAAAAGGATAATCATGACACTGCATGCAGCTACCATCCTGGTCCTGCAGTCTTT CATGACCGGATGAAAGGGTGGAAGTGCTGTGACATTCATGTAAAGGAATTTGATGAGTTCATCACTATTCCTCCATGTACAAAGGGATGGCATAATGCGG ATCCAGGGTCCTGATCTATGGAGACATCAAAGGATGAGTTGTTTTGTTGCAGGCACTGTTGCTGTAATTGAAAAGGAGAGTCATTAATTAGAACAAAATC ACCCCCACCCCATCTCTCACTTAGTCAACCTCTATTGTTAACTTGGTTGAGTTCATAAGAATCCACTCCATGAGAATGATTACTGTAATAGTCTAATCCT GGAAGTTGTAGGAATATGGTTTTGTTGTCATGTGTTCCTTGAATAACAGGATGTTTTTCTGAATGACCAGTTTGGATCTGTCTAATCCTTAAATATCTCT GAAAATGGTTTTTGTGCCTCTAGTTTTATTATCATATACAAGTATTACTTATAGAGTATATACAAGTATTTTTTACTCACATGACTTCACCTCGTGTAGG TTTTTCACTGGTTGATGGGAATGGTGGAAACCAAATGATATTTAGAAGTTGTAGTATAAAACTATACTAGTCATTCTTCTTTTTGAAGAGGTTACATTCA TTTTTTCTCATAGGGTATGTACTCTGCATCCTTTTGAAAAAAGAGGGGTTCGTGTAATAAAGCTAAATGTGAAGAGAGCTTAGTGTACTTTGACATTGAA GTTTGAGTTACATGTTACGATGCATAACTTTTCTAGTGATATTGTCTTAGAGGGTACTGGAGAGAAGAATTAAATGAGAACCTTGAAATGTGAACACAGG GTTTATAAGGACA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_44398; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_1568
| Blastp | Cysteine and histidine-rich domain-containing protein RAR1 from Arabidopsis with 67.04% of identity |
|---|---|
| Blastx | Cysteine and histidine-rich domain-containing protein RAR1 from Arabidopsis with 67.38% of identity |
| Eggnog | cysteine and histidine-rich domain (CHORD) containing 1(ENOG410XPV6) |
| Kegg | Link to kegg annotations (AT5G51700) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426573.1) |
| Pfam | CHORD (PF04968.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |