| Id Trinity | FTRINITY_DN54632_c0_g4_i9 |
|---|---|
| Name Transcript | Ll_transcript_239 |
| Sequence | CGGTAAGAAAAATAAAATGAAAATGTGTACCTTAAAGCACGAGGGATATTTGTTGATGAAGGAGAAGAGAACAAAAATGGAGTTGATGATTCAGTAGTGA AGCTTCTTGAATAATTTACAAGGGTCCTTGATGAAACCCTCATTACTGATTTACAAAGCGTGGAAGCCATTATTCCCTTCCACATTCCTTCAACCCCTTA AACCCTAAAATTCATAATTGGGCCTGGCCCTAATAAAATAAATAATAAACCAGCCCGGTGAGTCAACCCGACCCGACCCGGTTGAGTATCCTATTGAGTG TGTGGTTCAGTGAAACCTAATGGTGGGTGTGGCGAAAGAGTAGAATTGAGTTGAACATGGCAGAAGAAGCAATTCTGGGTTACTTGGAACACAATGATGA GATTAAAGACTCAGGTGAATTTGCAGAAGAACGTGAGATTGAGCATAATGAGATAGTGAATGTGATAAAGAGTCTTCATGGTTTTAGATATGTGGATGCT GAAGATATTAAGAGAGAGTCATGGGTGTTAACCGATGAAGGGAAGACATATGCGGAAGCAGGATCACCAGAAGTGCAACTTTTTTTGGCAATACCAGAAG AGGGTATTCCGAAAGATGAGCTTCAGAAAAAGGTTGGTCCTTCACTTTTCAAGATTGCTTGTGCCCAGGCTGCTAAGAACAAATGGCTTGATATGGGAAA ACAACGTATCTCTAGAAAGGTCCAACATGTTGATGACAAGGTCAAAGATTTGCTTCTTCAAATACGACAAGGACAGGTGATAGGTTCAGATGATATCAAG GCACTCAAAGCACGGAAGCTTATTGTTCCACAGACATGGAAGGGTTACTCGGTGAAAAAGGGTCCTAACTATGCGCCAAAAAGAAAGCAGGTTGTCACTG ATTTAACTCGGGATAATTTTCAAAGTGGTGAGTGGAAGGAGTTAGAGTTCAAAGAGTACAATTACAGTGCTAAAGGTCAGCCTCTTGAGGGTGGTCATCT TCATCCACTTCTGAAGGTACGGTCTCAACTGAAGCAGATTTTCCTCTGCATGGGGTTTGAGGAGATGCCGACAAATAATTTCGTGGAGAGTAGCTTCTGG AATTTTGATGCCTTGTTCCAGCCCCAACAACACCCTGCTCGTGATTCCCATGACACTTTCTTTTTGGAAACTCCGTCAACAACGAACATTCTCCCAGAAG ATTATGTTCAGAGGGTGAAGCAAGTGCACGAATCTGGTGGTTATGGATCTAGGGGATATGCATACGACTGGAAAAGAGAGGAAGCAAATAAAAACCTTCT GCGAACTCACACAACTGCTGTTTCCTCCAGAATGCTTTACCAGCTAGCAAAGAAACCTTTTTCTCCAAAGAAATATTTCTCTATAGATCGTGTTTTCAGA AATGAAGCAGTTGATCGAACTCATCTTGCTGAGTTCCACCAGATAGAAGGTATGTGAGATAGTACTGAGTTTCAGTGCATGGGGTTTTAAAAATTCCTTT CAAATTGTTCATCTTGCAATTGAATTTGGCACACCTTTGATAGCCGTATCTCTTAAAGTGGCTTTACTAAGGGCCTGTTTGTTGGCCAGAATGGGATAAG AATAGGATGGAGAGTAGGATAAGATATGAGCAAGGTAAGTAGCTTACTTTTTATTGTTAAGTAGGCATATTGTGGGTATTTCGAGAATTGGCACTGATAG CCATATTGTGGTGGGTGTATTTGAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_44412; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_239
| Blastp | Phenylalanine--tRNA ligase alpha subunit, cytoplasmic from Arabidopsis with 77.11% of identity |
|---|---|
| Blastx | Phenylalanine--tRNA ligase alpha subunit, cytoplasmic from Arabidopsis with 77.11% of identity |
| Eggnog | phenylalanyL-tRNA synthetase, alpha subunit(COG0016) |
| Kegg | Link to kegg annotations (AT4G39280) |
| CantataDB | Link to cantataDB annotations (CNT0000307) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413281.1) |
| Pfam | tRNA synthetases class II core domain (F) (PF01409.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |