| Id Trinity | FTRINITY_DN54635_c1_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_1263 |
| Sequence | TACTAGGCATGTCGGCAGTTGACCAAGCAAATAAATCACGGTTTGCCTTCAACGAGGCTTCTAACTTCAGCTTTTGACTAGGCGGAAGGGTGTTGCCCAG GTAGACCATTTGACCTGAGGAGGGGCCTAACTGCAGAGTTGTTTTTTCTCCTTCTGGCTGCGGCCGGATGAAGTGAAATTCCGGCCGCAATCAAGATAGG GGTCAAGGATGTCCATGCCCCATCTGCAGAAAGGCCAAGGTGCTTGTGTAGTTGTCAGCTCTTCGGGCGGGGCTTTATGGAAGTCAATGAATAGGTGGCA ATGGGTCCACTTCCGAGTGAGGTGACGCGTCTTGTTCTATAGTTGGCCAATAGTACCCAACACGCAAGACCTTCTTGGCAAGAGGTGTCGCGCCCAAATG AAGTCCACAACTCCCTTCATGAATTTCCCGGAGGACATAATCCGCCCGTTCTGGTCCAAGGCATTTGAGTAGTCTGCTCGGGCGTTGCTCTCTCTGGGCA CATGCTGGATAGTTGCTTCGCTAAAGCTGGCCATGAGCTCCTTTACTTTGAGCAGATACTTTCCAAGGAGGAGGTAATTGGTTTGATATTCACCTGTAAT TTGGGAAACAACTAGTTGAGAATCACTACAAATTAACACCTTTGGGCACCTACCTCTTTTGCTAGCTGTAACCCGGCAATGCAAGCCTCATACTCAGCTT GGTTGTCGGAGGTTGGAAATGTGAAGGTGGGGGAATGCTCAATAGTTATCCCTTGATCGTCCTCCAGTAGAATTCCAGCCCCACTACCCCTTGGATTAGA TGATCCATCCACATAAATAGTCTATACGTGTTCTGAATTACCCTTTGGCGCAGTCAACTCAGCAACAAAATCAGACAGCACCTGACTCTTGATAGTCGTA CGAGGCTCGAAATGAATGTCAAACTGTGAGAGCTCTACGGACCAAGCAATCATCCGTCCTGCCAATTCTGGTTTGTGTAACATCTGCCTGATTGGCTGGT TGGTTCTAATAACAGTTGTATGTGACTGAAAGTACTGGTGTAACCTTCGGGTGGTTATTAACAACGCATAAGCCACCTTCTCCAGCTTTTGATATCTCAA CTCTGGTCCTTGCAGAGCTTTGCTTGTGAAGTACACAGGATTATGCCCTTCCACCGTTTCTTCTATCAGCACGGCAGCCACTACCTCATCGGACATGGGG AGATACACATACAGCACCTCATCGGGTGTTGGCTTAGAGAGAATTGGAGGGGCGGCCAAATATTGTTTAAAAACTTTGAACGTCGCCTCGCATTCGTCGG ACCATTCAATCGTCTTGTTTTTCTTCAGCAACTGAAACAAGGGGAGGGAATGTTTAGCAGCAAAAGATAGGAACCTGGATAATGCAGTTAGGCGCCCGTT CAATTGTTGTACTTCCTTAACTGTGCAGGGGCTTCTCATATCAATGATCTCCTGACACTTTGATAGATTCGCCTCAATCCCCCGACTGGCCAGTAAGAAA CCAAGGAACTTTCCGACTTCTATCCCGAAGGTACACTTTTCAGGGTTGAGCCTCATGTTGTACATGCTTAGCTGCTTGAAATTTTTCTCTATAATGGAGA CATGATCCTCGCTGGGGAGGCTTTTGGCGATCATGTCATTCATGTATACCTTCATATGGTCGCCAATCTGCCTATCGAAGAATTTGCTCATCATCCTTTG ATAAGTTGCCCCTGCATTTTTCAACCCAAACGGCATGACTGTATAACAATAGGCAGCTTGGTCGGTAATGAATGTCGTTTTCTCCTGGTCTGGGGTACAT CGGGATTTGGTTGTACCAGGAATATGCGTCCATGAAGGATAGGTATTGATAACCTGAAGAATTATCCACCAAATGATCTGTATAGTCCACACACATCCGC CATTTCCCTGAAGTTTTTTTCACTAACACCACATTTGCCAGCCAGGTGGTGTATGTGACCTCCCGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_44447; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_1263
| Blastp | Retrovirus-related Pol polyprotein from transposon 17.6 from Sophophora with 29.82% of identity |
|---|---|
| Blastx | Retrovirus-related Pol polyprotein from transposon 17.6 from Sophophora with 30.34% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451851.1) |
| Pfam | Reverse transcriptase (RNA-dependent DNA polymerase) (PF00078.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |