Id Trinity | FTRINITY_DN54635_c1_g1_i6 |
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Name Transcript | Ll_transcript_1255 |
Sequence | CGTTCTGGTCCAAGGCATTTGAGGAGGGGAGTGGAGAATCCTCGCCTGTACTGGGTTCCTTGTATCAATGTATACCATGCACAACATCTAAGGAACCTCT GCTTGTCCTTCGGATCAGCTGGCAGGCTGCCATGGAGGATGTACCGGATGAAAGGACCTGTCCAATTATCTGGGATCGCCACCTGTTCAACTGTCATGAC TCTGGGCTGATAAATTGTTCCCTGGACCACTGATCTATTATTTCCAAGGCTCTTGGTGCTGGCGAGCTTCGAAAGGATGTCCGCTCGGGCGTTGCTTTCT CTGGGCACGTGCTGGATGGTCGCCTCAACGAAAACGGCCATGAGTTCCTTCACTTTGAGCAGGTATTTTCCAAGGAGAGGGTCCTTGAATTGGTATGTAC CTGTAATTTGTGAAACAGTCAGTTGAGAGTCACTGCAAATTAAAATCTTTTGTGCACCTACCTCCTTTGCTAATTGTAGCCCGGTGATACAAGCCTCATA TTTTGCCTTGTTGTTGGAGGTTGGAAATGTGAACGTGAGGGAGTGTTCAATGGTGACCCCTTGACCATCTTCCAGCAGAACTCCAGCCCCACTTCCTCTT GGATTGGATGAGTCGTCCACATAAATTGTCCATGCATGCTCGGAGTGTACTTGGGGGGCGGTCATCTCAGCTACAAAGTCAGACAACACCTGGCTCTTGA TGGCGGTTCTGAGCTCAAAACGGATGTCAAACTGCGAAAGTTCGACGGACCAAGCGATCATTCGCCTCGCCAGCTCTGGCTTGTGTAAAATCTGCCTGAT GGGTTGGTTAGTTCTGACAATCGTTGCGTGGGACTGGAAATATTGGCGCAATCTCCTGGTGGTTACTAACAAGGTGTAAGCCACCTTTTCAAGCTTCTGA TACCTCAACTCGGGTCCCTGTAAGGCTTTGCTTGTGAAGTACAC BLAST |
Tissue | flowers |
Gene name | LI_gene_44447; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_1255
Blastp | Ribonuclease HI from Halobacterium with 34.96% of identity |
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Blastx | Ribonuclease HI from Halobacterium with 34.96% of identity |
Eggnog | ribonuclease H activity(COG0328) |
Kegg | Link to kegg annotations (VNG_0255C) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019416415.1) |
Pfam | RNase H (PF00075.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |