Id Trinity | FTRINITY_DN54656_c4_g1_i4 |
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Name Transcript | Ll_transcript_255 |
Sequence | TTTTCATCTCTAATTCTTTTAATTTCAAAACTAACTCATTTCAACAAATCATTCATAAAAATGTTATCTTTTTCGTGAAATGTTTTGTGGGTAGTTGAGA TATGCACACTCCACTGCTTGTGTGTTTTTGTGTTTTTTCTGGAATCTCTCTTATTTGCCTTTTACATTTCTCTCTGAAACTCTGAATCAGTTTTGTCTAT GTTGTTTTTTTGTTTTATGTATAAAATGTATATCTTCAATGCATCTATTGTTATGATGAAGTTCTGGTTCCATTTAGTGACACTGTTTACCCAAATCCAT TAGTGCCTTGGAATATTGATTATGAATAATTTTAAATCCTCCTAGCATTTTAGCCTAAAAATATTCTTAAAAATATGTTTTTTATACTATGAAGACATTG AATGTATTCACTCTTTCATTTAATAATTCTTTTGGCTAAAATACTTGGAGGATTATTTTTTGTACCGAGTATCCCCTCATGAGTAAGGAACTAAACCCTT TCCGGTGTATGACTGCCCATCCCAAGTGTCTTTGTCGGGAATCAAATCTTTGTCCTTTTAGTCTTTCTAGGGATCTAGCGGGGCCTTGCACCACTAAAAC AACGGCTTGTTGGTGTTTGGAGGATTTAGTATTACTGTATTTCCATTTTGAGGCAGTGTTGTCACACCTATTTCATTAATAAACTGCAAAACTACTGAAT TCATCATAAAAGTTATTTTTTTTAGTTTCAAGTTGGTATATAATTTTTTTGTTTCTGATTGTCCTCACATTTGTCTTAGTTTTCAATTAAATTCACAACG TTGATCTTTTTGGAATGAAATAATTACAAAATTTATCTTTTATTTTACCATAAAAAAGTGAGGTTTAAGATATGAAAAGTGATAGAAAAAACAACTTAAT GAGACTGTTTTAAGATCCCTTGTTCTATATGTTCTTCCTTCATTGTAATCTATGCTTCATTTTTTGTTTTCTTATGTTCTCTTTGGGAATTACTCTAATA TCTATATACTTTTATAGAACTGGTAACTGGGGTGTGTTTCCATTTGTCTAACATTTATTTAGTATTGGTTGTTCTCATTGATGGAACTTTTTAATGTTAT TTGAATATCAGGTTTTAGACATTGTATTTCACACTTTGTATTTGCTATATTTCACTTTTTTACTACATACAAATTTTAATGATACATCAAAAGAATAAAA TGGAACAGGGTATTTGCTATATTATAAAAGCAAAAACTAATAAATTTTACCCTTAAGAGTTAAGAGTACCACAGTCCAGAGCAAAAGCTATAGAGTTTCT CATTTCATTCTTCTTCCATGACTTTAGCTTAATCATATTTAATATCAGACTAGTAGATAACAAATTTGACATTTAATTGAAATATTCATTCTCTCTATCA TACTGTAATAATGTCATTAATAACACTTAAAGCAACTATCCCCTTGCCCATTCCTTTTACTTACTGTCAAACAATTTACAAAGTCAGATTACATAAGATC ATTTGAAATTTCTTTTCAACAAAATATGCTGATTTTGGAATCACATATGCAGGCTTTAGCATCGACTATACGTTGAAGGAGTTCAGTATTTTACCCCAAT AACTGGTTCCTTGAAATTTATGTTCGTATTTCTATACTGGAAATTCTTCTGAGCAATCTCTTAGCCAACTAAGGGCCTGTGCTACCATGTCCATCTTGGG TAAACTTCGCTGTGTCACTGTAGATGTTACAGGTACCCTGATGGCTTACAAAGGGGAGCTTGGTGACTATTATTGCATGGCAGCCAAATCTGTTGGTCTT CCATGCCCGGACTACAAACGTATGCATGAGGGCTTTAAGTTTGCGTATAAAGAAATGGCAACTAAGTATCCATGTTTTGGGTTTGATGCCAAAATGCCAA ACATTGTATGGTGGAAAACTTGTGTGCGAGATTCTTTTGTCAGGGCTGGATATGATTATAATGAGGAGACATTTGAGAAAATTTTCAGGCGCATATATTC AACATTTGGTTCATCTGCTCCTTATACTATCTTTCCAGATTCTCAACCATTTCTTAGATGGCTTCGTGGAAAGGGTCTCAAAGTTGGTATTGTGAGCAAT GCAGAGTATCGATATAAAGATGTAATTCTTCCAGCTTTAGGTATAAACGAGGGATCTGAGTGGGACTTTGGTGTGTTTTCTGGTTTCGAAGGCGTCGAGA AGCCAAACCCGAAATTTTTTGAGATTGCACTTGAAAGGGCTGGAAATTTGAAACCTGAAGAAGTTTTACATATCGGGGATAGCATGCGCAAAGATTATGA GCCAGCCAAGAGCATAGGGATGCAAGCGATATTATTGGATAGGTTTAAGACACCAGATGCTGTGGAGTGGAGGAAATCAGGAGCTGTTGTTCTTCCCGAC TTGGTTGCAGCACAAGAATGGCTATCTTCGGAGAACTCGACTTTGTAGAAGTCCTTCTTTTCCTAAAGTAATATTAAAAATGCATCAATTTTCCCCTTTT AATTATATTAGGAATGTTGCATTGTAGCTGCTATCAGATATGCTTGGGAACCTGGTGTTGAAGACCATGTTCTGATATAGCTCAGCTGTAACTTGTAGTA CAAACATTTTCAAATGTTTCTTGTTTTGTGTTTTATTAATAATGTTGCCTTCTTTTCCATGCTATGTTGTTTCCCGGAGTTACTTGAGTTTACATCTTAC TTTGGGAGCCACATCTTCTGTCCTAAGCTTTGTACACTTTGTATACTCCTTATTTCGTATTGGTTCTTTTCCATGCTATGTTGTTT BLAST |
Tissue | flowers |
Gene name | LI_gene_44623; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_255
Blastp | Haloacid dehalogenase-like hydrolase domain-containing protein 3 from Bos with 31.6% of identity |
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Blastx | Haloacid dehalogenase-like hydrolase domain-containing protein 3 from Bos with 31.6% of identity |
Eggnog | Hydrolase(COG1011) |
Kegg | Link to kegg annotations (510680) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019426458.1) |
Pfam | haloacid dehalogenase-like hydrolase (PF00702.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |