| Id Trinity | FTRINITY_DN54663_c2_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_548 |
| Sequence | TAGAAGTGAATATTATTTCCCTAGTAAGGCGAATTTCATTCTCACTTACTATCGCCGCCGTGCCCTTAATCATGGCCACCGCCACCAACCCACAACCACC ACCACTGCCGCTGCAAGCACTGAACTTAGAGTCTCTTTCCGGCATAGACTCAACAACTCTGTCACAGTCTGAAATCCAAGCCCTCTCTCTCTGTTCTCTC TCCACCTTCGATCTTCGCTCTACGCGTCACCTCGTCACTCCCACAATCGATCCTTCCTTCTTCAACGAGAGCTCCGGTTCCCACCGACAAACCTACTCCC GCCGCCGCCGCCTCCCCGCCACCAACGACGTCGTCACCGACAGCAACATCGATAACCGCAGAATCATCGACTATTTAAAGCAGTTGATCAGGGAAGACCC GAAGTTCGATCAAATCGAGCTTCTGCAACCTTGTGTCCACACAGAGGTTGTTGCTCCGGTTAGAGATCTGAGAGTGGGAACGGAGTTAGGGTTAGTGAGG AAGAGGAAGAGAGGGAGGAAGCCGAAAGTGAAGGTCAATTTGGATGAGTGTTACAGAGAGATACGGATTGTGAATAAGAATGGTGTTGCTATTGATTTTT CGGCTTTGGCGGTTGCGGAGGATCCGTATGCGGAGGAGTTGAGGAGAAGGACTGAGGGGTTGAAGAGTGAGGAGGAGCTGTTAGGGTTTTTGAGGGATTT GGAGGGGCAATGGGGAAGTACGAGGAAGAAGAGGAAGATTGTTGATGCTGCGAGTTTCGGCGATGTCTTGCCACGTGGTTGGAAGCTTTTGCTTGGGTTG AAGAGGAAGGGTGGCCGCGCTTGGATCTATTGCCGCAGATACTTGAGCCCTAGTGGACAGCAATTCCTGTCTTGCAAAGAAGTTTCTTCATATTTGCAGT CTCTTTCCGGCCATAGTGACACACAGTTACAAATCAGTCTTAGGAGTGAAAATATGCTGCAGGAACATACACACATGGTGACTACTGAAAACTATGCAGG TTTTACCCTTGAGGATGAAAATCAACTGCAGATTGTTGTAGCTAACTCAGATGTGCCCTGTTTATCTGTTTCTAATGAACGATCGAAAGAAGTGGCCTTA TTGGGGTTTGACAATCTTGCAGATGTGCAAATACATGACCTATTTGAATGTCATAAATGCAACTTGAGCTTTGATGAGAAGGATACATACTTGCAGCACT TATTGTCTGTTCACCAGAGGACAACAAGGCGTTACCGACTTGGTTCTTCTGTCGGAGATGGAGTTATCATTAAAGATGGAAAGTTTGAGTGCCAGTTCTG CCATAAGGTGTTTCAGGAAAGGCGTCGCTACAACGGTCACGTGGGGATCCATGTTAGGAATTATGTGAGGAAAGTTGAAGATTCACCAGGTCTGGTAAAT GTCCAAAGGAGTGACAATTCTCCAGTCCGGGAGGACAGACATTCAAGGATCTCTAAGATGGATGCTCTTATTGAAATTGCTCAAAACTCTATCATGGAAC CCCATGTTTCATCTGAACTTAGTTTAATAATTCCTGATTTGGAAATTTCTGTTGACAACTTAGATCAAGACATTAACATGGAATCTCCTAATGGTGAACA GCGAATGAAATATTGCCTGACTGGCAAAAATGTGGTTCAAGATTTAAATCAACAAGATTATCCTGATCTACTTGGGGAAGGGGAAGTAGAGGAAATTGAT GTTGACAACCAGGTTATAGATGCAAAGATGGTTACTTGTCTAGATAACACGGGTTTGTTTTCTGTAAACGAGCAAAATGTGAATGCATCTGATATTTTTA TGGGAAAGGATGATTTAGAATTGACTGTTGAGGAGTTCGATCAGTATGGGAGTGATTTGGAAAGAGTTTCTCAAAGCCCTTTATTTCATTTATCTGGCAA TCACATGATACCTGAATCTGAGAAAAATGAAAACTCTGGCTGCACTAATGCCAAGTGGCAGTTTAAGCTTGATGGAGACAGTAGGAACAAGAGTGAGTTG AATATTGGTTTAGATGGCTGCATGGATGTACCGGTTAGCATTAATGTTCAATCGACAATGATGCCAGCTTCTTTAGAAAATGCGTTGCACTCAAGGGATT CTAAGCAATCTATATCCACAAAGCAATATTTGGATGAAATAGGCCTCCAGTACAATTTTGTAAGTGGTCAAAATTCTCTTTCTCTGCTTGATGTGACTAC TGAGTTGGCAAACGACACAGTGATGGAAGGGATGCATTCATCCCCAGTTAATTTTGAATCACAAGAAGTTACGATAAATATGGGTGGAAGAAATCAGCTT ACGGCTGTGTGCGTGTGGTGTGGAATAGACTTTACCCATGATGCTGTTGATTCTGAAATACAACCAGGTTCTGTTGGATTCATGTGTCCAGCATGTAAGG GAAAGATCTCTGGTGAAATCAATGTGTTGGATAGTGGAACTGGTGAATGATATTTTTGAAGGATATCAGGTATGGGAGTTGGTGGTGTAGATTGAATGAT GGTGGTATTATCTCAAGTGATTCTGTTTATTTGTAAGATAACCAATATTGTGATGTAATATTACTGTCTAGTGTGTGTATTCCATGATTACACGTGATTT AGTATAGTAGTAACAACACATAAACCACAATCTATGTGCAAATTCTATTGATCTATATCGAATGAGTTAGATGAGATTTTACATGGATAGCAGCAAGAGT AACTAAAACGGCCAACACATAATCAAAGGGAAATATTATCCACAAATGCTATGTCTCATAGCTGTTCATGCCACCAACATATAACAAATAATATATAGGT CTTTGACCTTTTTTTAAGGATTTTATTTTGGTTCTATTTATAAGTCTAATTTTGAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_44705; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_548
| Blastp | Methyl-CpG-binding domain-containing protein 8 from Arabidopsis with 45.11% of identity |
|---|---|
| Blastx | Methyl-CpG-binding domain-containing protein 8 from Arabidopsis with 47.97% of identity |
| Eggnog | binding domain) protein(ENOG410XW64) |
| Kegg | Link to kegg annotations (AT1G22310) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440347.1) |
| Pfam | Methyl-CpG binding domain (PF01429.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |