| Id Trinity | FTRINITY_DN54665_c1_g3_i1 |
|---|---|
| Name Transcript | Ll_transcript_2572 |
| Sequence | ATTCAGTGTCCCACTTCTTTCATGGTCTACACAACCACTCTTCTAGAAAGAAGAACATTAATAAATATGCTCTTCCACTAAAGCAAAAATTGAAAATTCA GTATTGCTTAAAATCCAAACCAAGTTGCTTCTAAGTTGTTAATCTACCAATTCTCAGAGGAACACCGAAAACTCCAATCCGGAACCTTTCTGAATCCCCA ATTCTGCACTTCTTCAATTCATCGCGTAAGTTACAATTTTGCTATGAATTAACCCAATTCTCACGCCAATTCGTCTCATTTGTAACTCTAAGGGTTTCGT TTCGCTTCCGAGAATTCGAAATTTAGAAACTCTGGACAAATTCGAAACCCTAGTTGGGAGATGATTTTGTAAAATTCGGGGTGATACAAGATTGGGAATG AAGACGCTAAATGGCTTATTTGGTGCAAGGCGCAGAAGGATTCATGGAGTTTTCAATGGCCTTTGTGCTATGCTTGTGTTTTTCTTCTTTTACAATCGTG AATATATTATTCGAAACCCTCTTCTTAAGCAATCCACATATTTGGGGAATGATCAAAATTCAATTTTGAGAAATGGGCATTCTCACATTGCTGTGATAAA CCGTAGAATCATTGAAACTGATCTCAGTGATTCAAGGGTAGTTGGTGAGCCTCATGACAAAGATTTAGCTCTAGGTAGTAGTCCCGGAACCTGTGATGGA TTGCTCCACCATGATGGTTATGCTAGCCGATGTGAATTCTTAAAGGTTAATCCGCAATGCTCTTCGGAGGGATATCTTGATTACTTGAGGTTTTTCTTTT GTAAATGTCAAAGTTTTCGATTACTTGGTTATCTAGTATTTGCTCTGTGGCTTGCTGCTTTGTTTTATCTATTGGGGAACACTGCGGCAGACTACTTTTG CCCGTCTCTTGAGCATCTCTCAAGGCTCTTGAAATTGCCTCCAACTGTGGCTGGGGTTGTGCTGCTCCCACTCGGGAATGGAGCGCCTGATGTGTTTGCC AGTATAGTGGCTTTTGTGGGTACTAAAACAGGTGAAGTGGGTCTTAACAGTGTGTTAGGTGGTGCTCTTTTTGTTACCTGTATTGTTGTTGGAGCTGTTT CTCTGTGTGTTTCTGATAAGGAGATTCAAATTGATCGAAGATGCTTTATAAGGGATGTCAGTTTCTTTATATTCACTCTTGTTTCACTTTTAGTTATTTT GGTTGTTGGTAAGGTCGGTGTTGGGGCAGCGGTTGCTTTTGTATCAATTTATGTTGTTTATGCATTCATTGTTGCTGCCAATGAGATATTGCGGAAACAT GCACGTAGGTTGAAATTGGATGCTGTGACCCCATTGCTTCCTGTCCAGGGAAGTGTGTTCTCTCAAGGTTCCGAAGAGGATACTTCTATCTATAGTTCTT TGCTTCACTTAGACACCGAGAATGACCCTCCCCGTCTCCCTCCTTCCTTGCCACAGTGGATGTGGTCTTCAAATGTGGCTATATATTCAAACCAGGGAAA TAAAATCACTTTGGATGAAAGGCCTCCTTGGGGATGGAGTGACGAGAGCATGGGAAACACCAGGTTGTCCTTCTCTGTTTCAAAACTTTTTTTATTGATG GAAATGCCACTGTCAATTCCTAGACGGCTAACAATTCCGATGCTCAATGAGGAAGTATGGTCAAAGCCATATGCTGTAGCCAGTGCTTCATTGGCTCCAA TTCTACTGGCCTTTTTATGTGGCACCCAAGATAATATGAGTTATGAGAGTACTATTCTTTCTTATTGTATTGGTGTTACCACTGGATGTACACTTGGTAT TCTAGCATATAAATACACCGTGGCTGATCATCCACCGCGCCGGTTTTTGATTCCATGGGTTCTTGGAGGATTCATCATGACCATAGTGTGGTTTTACATA ATAGCAAATGAGCTTGTGGCACTATTACTATCATTCGGTGTAATTTTCGATATTAATCCATCCATCCTTGGATTAACTGTATTAGCATGGGGAAATTCAA TGGGAGATTTGATGTCAAATGTTGCATTGGCATTAGATGGAGAAGATGGAGTTCAGATCGCTTTATCTGGGTGCTATGCTGGTCCTATGTTCAACACACT TGGTGGTTTGGGGATCTCATTGCTGCTTGGGGCCTGGTCAAAGAAACCTGCTTTGTACGTACTGCCTAAAGACAGTAGCTTGTTTTACACCATGGGATTT CTTATCATAGCACTGCTATGGGCACTTATTGTTTTACCACACAACAATATGCATCCTAGCAGAATATTAGGAATGGGTCTAGTTGCCCTTTATTTGATAT TTCTCTCTTTCAGGGTGTGCACTGCCATGGGACTCATAACAGTTGCTGGTTTAAGTTGACTTTTCATATGATTGATCTACATTGTAATCTAAGTGCGTAT TGTTTCTACATCTCTCTTTCGAACATTAGGCCATGGAATCAAAAAAATCAGGAAAGAAAAAATGGGTATTGAGTACATAGGATCAATCTGGTAGTTCCTT TACATTAGTTGAAAAATGAAATACTTCCTGGATGCCACTTACTGGATCTCTTTATATCTTAGTGTCTTTTATTCAATAAGGAAAAATGTATTATAAGAGT ACAAGGGTGTCTGCCTAATACAATGAGAATATAAAACAGTGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_44725; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_2572
| Blastp | Cation/calcium exchanger 4 from Arabidopsis with 60.95% of identity |
|---|---|
| Blastx | Cation/calcium exchanger 4 from Arabidopsis with 61.08% of identity |
| Eggnog | exchanger(COG0530) |
| Kegg | Link to kegg annotations (AT1G54115) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443562.1) |
| Pfam | Sodium/calcium exchanger protein (PF01699.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |