Id Trinity | FTRINITY_DN54672_c1_g1_i5 |
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Name Transcript | Ll_transcript_2505 |
Sequence | GGCTGGGGTTTCTCTGATTTAGGAAAACTTCCTTCATGTGATGTGGTATCAAAGCGTGATCATTTATACCAGTGAATTGCTTTTATCAACCAGTTTTGGA AGTCTCACATCAAAAGGGCAATGATATTGGTTGGTCCAAGCCTTGGCTCTGCGGTGGCCATAGACTTTGCCATCAATTACCCAGAAGCTGTGGAAAAGCT TGTTCTGATTGATGCTAGTGTATATGCAGAGGGAACAGGAAACCTAGCAACCTTACCTAAGGCAGTAGCATATGCTGGAGTATCTGTATTAAAGAGCATT CCGCTACGCTTGTATGCTAACTACTTGACCTTCAATAACATATCTTTCAGTATCAGCCTTGACTGGACTAATATAGGCCGCTTGCATTGTTTATTGCCCT GGTGGGAGGATGCTACAGTGGATTTTATGACTAGTGGTGGTTATAATGTTGCTTCCCAGATAAAAAAGGTGAGGCAGAAAACACTCATCATTTGGGGGGA GAATGACCGCATCATCAGCAATAAGCTTGCAGTGCAACTGCACTGTGATTTATCTGATGCAATTATACACCAAATACCCGATTGTGGTCATCTTCCTCAT GTCGAAAGACCGAATTCTGTTGTCAAATTCATTGCTGAATTTGTTAAGAGAGACCAGGGCAGCAAGTGACTATTTTTCAGTAATATGAAGGTTGAGATGA CATTCTCTAACAGAGCGGGCAACAAAGCAGTTTACATTTTGGTAAAGGATCCAACAGGGGATAGTGCAAAATATGTTTTTGGAATGCCTTTCTTCCCTAA CCAGAGTTTTGTTTGAGTGCACAGATATTCTTCCTTGATAACACTATTTATCAGTACTTCCATCATGATTTTGTTCAGATTGTGGATTGCAGTAAGCCAA TTATATTAATCATTGATTTCAAGAGATTATTATTTTAGTTTCTGAAATTGTAAGCACCGTATGTGGATCAAAATCATTTGAAATAAAATACATATTTTTC TTCCAAATGATTTTAGAGAAGAAAACAAGGCTAAGGTATTGATTTAGTCTTTTATCTTATTATTGACTAAAGATGAGATAAAAGACCAAAACACCGTTCT ACCCATAAAATTCTGATTTACTTTTTAAGGATAGCCCACAGGTTGGAAAACATATGAAATCATTCTACTTTGTAAGCATGAATGGAGGCATGTTATTCTA TTTAGAATTCTACTCAGTATCTTACTGTATTATTATCTGCCTTTTTGCATGAAAAAACATAATTAAGTGGATAAAATCTCC BLAST |
Tissue | flowers |
Gene name | LI_gene_44787; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_2505
Blastp | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase from Comamonas with 26.98% of identity |
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Blastx | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase from Comamonas with 27.69% of identity |
Eggnog | - |
Kegg | - |
CantataDB | Link to cantataDB annotations (CNT0001074) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019445900.1) |
Pfam | Alpha/beta hydrolase family (PF12697.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |