Id Trinity | FTRINITY_DN54673_c0_g1_i2 |
---|---|
Name Transcript | Ll_transcript_1944 |
Sequence | CTGGACTATAGGATTTACTTATAAGTTATAACCCCTAACCTAAAACCTCAATCCATCGCCACCACCCTTCTCTCTATCGCCACCGTATATTTCTCCATCA CCACCGTATATTTCTCCATCACCACCGTGCACCTCTCAGTAGCATCCACCATCAACAACCATCAAAAACCACCAATCAGAAGAGATGACCCGCGGCATAA AACACCGAATGAAAGCCAAGAGAAAGAACAAGGTGTCAAAGAAAGGAGAAGGGTCATCTTCATCATTGGGGCCACAAGTTCCAGTGAAAGTGTGGCAACC TGGTGTGGATAAGTTGGAAGAAGGTGAAGAGCTTCAGTGTGATCCTTCTGCTTATAACTCTCTTCATGCCTTTCATATTGGATGGCCTTGTCTCAGCTTC GATATTGTTCGTGACACTTTGGGCTTAGTTCGAACTGAGTTTCCCCATACAGTGTATTTCATGGCAGGGACTCAGGCAGAGAAAGCTTCTTGGAATTCTA TTGGAATTTTTAAGGTAACAAATATTTCTGGGAAGAGACGTGAACCATTGCCTAAACTTAAAGGTGATGAAGCTGGAACGGATGATGATGAAAGTGATAG TGAGGATGATAGCGAAGATGAAGATGAAAATGGTGCTCAGGGTCCCATTTTGCAGTTGCGGAAGATAACTCATGAAGGATGTGTCAACCGTATACGCTCC ATGACACAAAATCCTCATATCTGTGCAGCTTGGGCAGATACTGGTTATGTGCAAGTGTGGGACTTAAGCACTCATCTTAATGGTCTAGCTGAGTCAGAAA CAGAAGGTGTCCAAGGATCTGCTGCCGTTTTTAATCAAGACCCGTTATTTAAATTCAAGCACAAAGATGAAGGCTTTGCTATAGACTGGAGTCCTCTTGT TCCTGGAAGGCTTGTATCTGGGGATTGCAAGAATTGTATTTATCTGTGGGAGCCTACATCTGCTGCAACTTGGAACGTTGACAATACTCCATTTATTGGA CATACGGCTAGTGTCGAAGATATACAATGGAGTCCTACGGAACCTCATGTTTTTGCTTCTTGTTCTGTGGATGGGAGCATTGCAATATGGGATACCCGTT TGGGGAAGTCTCCAGCTGCGTCTTTTAAAGCACATAACGCGGATGTGAATGTAATGTCATGGAACAGGTTGGCAAGTTGTATGTTGGCCTCGGGAAGTGA TGATGGGACTATTTCTATCCGTGATCTCAGATTGCTCAAGGAAGGAGATTCTGTGGTAGCACATTTTGAATATCATAAGCACCCAATAACATCCATCGAG TGGAGTCCACATGAAGCCTCTTCATTGGCTGTTTCGTCATCCGATAATCAGCTTACGATATGGGACCTTTCTTTAGAAAAGGACGAGGAAGAAGAGGCTG AATTTAAAGCTAAAACCAAAGAAGAAGTAAATGCTCCTCAAGATCTGCCTCCTCAGCTATTGTTTATTCACCAGGGACAAAAGGACCTGAAAGAACTACA TTGGCACACACAAATTCCCGGAATGATCGTGTCTACTGCGTCGGACGGATTCAACATCCTTATGCCTTCAAACATTCAGAGCACCCTACCATCGGATGGT ATTTGATACAATGCAGTTTTCAAGCAAAACATGCTTCACTCACTATTCCATTGTTTTCATTTCTTTCTTCTCCCTTCAAGTTTTGTTATATTTGATTAGA GCTTTTGCAGACATAATAGGAGCCATGCAAAAAATTTACATGCATACATTGCTTGCATAATTTTTATGTTGTGAAGTCTTCTTTTAATGTTATATAAATG ATATGGAGCTAGCCTTTGCACCTATGACTGAAATTTGAGGGAAACTTGAGCAAAAGCTGAGTAGAAAGAAGTTAGAAATGGAAGAAAACAATAACCATGT TGAATGTGAAGTATTCTTGATGTTTTTTGAGTGCAACTAACTGCATGGAATTTTGTTAATCAAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_44792; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_1944
Blastp | Glutamate-rich WD repeat-containing protein 1 from Dictyostelium with 46.76% of identity |
---|---|
Blastx | Glutamate-rich WD repeat-containing protein 1 from Dictyostelium with 46.08% of identity |
Eggnog | Glutamate-rich wd repeat-containing protein(ENOG410XPDB) |
Kegg | Link to kegg annotations (DDB_G0291566) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463902.1) |
Pfam | Histone-binding protein RBBP4 or subunit C of CAF1 complex (PF12265.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |