| Id Trinity | FTRINITY_DN54674_c2_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_1646 |
| Sequence | GTTTAAAACCATCACATAAACATAACACAGTGAAGTAGATAAGGCACACGCGTGAAACCCCACTGACTCGGTCACATTCCACATAAAAGTAACAAACACA CCTCACAACATAACACTCTCTCACACTTACCTTTCTTTTAAGATAAATACACTTTCATTTCACACACTTCTAACAATAACACATTTTTCAACCTTCACTT CTCTTCTCTCCTTTTGTTTTTTAGGGTTCTGGAAACTAAAACCTTTCTCTCTCTTCACCATCCTCCAGTTTAAGGATATGGATTCGTTTGAGCCAGATGG AAATGGCAATGGCAACGGCAACAACAACGGCAACGGCAATGAGGAGTCTTTGCCACCACCCCCTCCCATTGTTCCACCAGATGTTGTACCTGTCAAAGCA GAAGATGTCCTTACTGTTCCTGCTGAACCAGTTAAGAAAAAGGCTTCCCGATTTCCGATAGCCAGACGCGGTCTTGGATCAAAAGGGATGAAGATATCTC TTCAAACCAATCATTTCAAAGTTAATGTCAATACCAATGATGGATATTTCTTCCACTACAGCGTGGCTTTTTCTTACGAAGATGGACGCCCTGTTGAAGG TAAGGGCGTAGGGCGAAAGATAATGGATAGGGTGCAGGAGACATATGATTCAGAGTTAAATGGTAAGGACTTTGCATATGATGGGGAGAAAAGCCTGTTT ACCATTGGATCTCTACCGCGAAACAAACTTGAGTTTGAAGTTGTTCTGGAGAATGTCACATCCAACAGGAATAATAATGGCAACTGTAGCCCTGACGACG GTCATGGGGACAATGACAGTGACAAAAAGAGAATTCGGCGCCCATATCGTGCAAAGACATTCAAGGTAGAGATTAGCTATGCTGCGAAAATCCCAATGCA GGCCATTGCCAATGCCTTACGAGGGCAGGAGTCAGAGAACTTTCAAGAAGCGATTAGAGTGCTTGATATTGTATTGAGGCAACATGCGGCAAAGCAAGGT TGCTTACTTGTCCGTCAATCATTCTTCCACAATGATCCGAATAATTTTGCTGATGTCGGAGGTGGTGTTCTTGGCTGCCGGGGATTCCATTCAAGCTTTA GAACTACACAGAGTGGCCTGTCTCTTAACATAGATGTTTCCACTACCATGATAATTCAACCGGGACCTGTTGTGGACTTCCTAATTGCCAATCAAAATGT GAGAGATCCATTTCAAATTGACTGGGCAAAGGCCAAAAGGACACTGAAAAATCTGAGGATTAAAGTTAGCCCATCCAATCAAGAGTACAAAATTAATGGG CTCAGCGAACTTCCATGCAGAGAGCAGACTTTTACTCTGAAGAACAGAGGTGGAAGGGATGGTGAAGAAAGTACGGAGGAAGTGACTGTTTATGATTATT TTGTTAATACTCGCAATATAAATCTCCGTTACTCTGCTGAGCTTCCATGTCTCAATGTTGGCAAGCCTAAAAGGCCAACATATTTGCCCATTGAGCTTTG TGAATTGGTGTCTTTGCAACGTTATACAAAAGCTCTGTCCACACTTCAACGGGCTTCACTGGTGGAGAAGTCTAGGCAGAAGCCACATGAGAGGATGAAG ATTTTGTCTGCTGCACTTAAAACCAGCAACTATGGTTCTGAACCCATGCTTCGTAATTGTGGAGTTTCTATAAGCACTGGCTTTACTGAAGTGGAGGGTC GTGTTTTGCCTGCTCCAAGGTTGAAATTTGGCAATGGCGAGGACCTGAATCCAAGGAATGGGAGATGGAATGTTAGTAACAAGAAATTTGTGCAACCAAC CAAGATAGAACGATGGGCTGTGGCTAACTTTTCTGCACGGTGCGATGTCAGAGGGCTTGTGAGGGATCTGATTAGAATTGGAGAAATGAAAGGAATTGCG ATTGATGCCCCATTTGATGTGTTTGAAGAGAATGCTCAGTTTCGCCGTGCACCACCTATGGTTAGAGTGGAGAAAATGTTCGAGAGTATCCAGTCGAAAC TTCCTGGGGCTCCCCAGTTCCTTCTCTGTCTGCTTCCTGATCGGAAAAATTGTGAAATTTATGGTCCATGGAAAAAGAAGAATCTTGCTGATTATGGAAT CGTTAATCAGTGCATGTGTCCTACTAGGGTGAATGATCAATTTCTGACTAATGTTATGTTGAAGATCAATGCCAAGCTTGGTGGGTTGAATTCATTGTTA TGTGTCGAACACTCTCCTTCCCTTCCCATTGTTTCCAAAGCACCCACTCTCATTCTAGGCATGGACGTATCACACGGTTCTCCAGGACAGTCTGATATTC CGTCAATTGCAGCGGTGGTCAGCTCTAGACAGTGGCCTCTGATCTCGAAGTATAGAGCATGTGTACGTACCCAGTCTGCAAAGGCAGAAATGATAGATAA CTTGTTCAAGAAAGTATCAGAAAAGGAGGATGAAGGCATCATGAGGTTGATTTATTTATAAGTTGTAATTTAATAACTAAATTATGACTCTCCTTCCAGT GGGTGGCACATGATCATTGAACCACACGGTTTTGGAGTATTTCGTTGCGATTTCCTCTACGAGCAAATGTTTCACTAAATCTGTTGGCAGTCCTATTAAT TTGTACCCTTCTTTTCCTAGTGGTCTATGTTAACAAATTGTCTGGCTTGGTTGGTTTCATCAACTGCAGGGAACTCTTGCTTGATTTCTATGTAACTTCT GGGAAGAGGAAGCCAGATAACATAATCATATTCAGGTGATTTTTCTTAGAAAGCACTGCTCATACATACTTTTTTTTGTTCTCCGTTTTTAGTAGTTAGA ACTATAAATGCTTGAAGTTTTTACTATGTTTTGTTATTGTGATGTTTGATATGGAATATAGTTGAGTAATGTTCAGTGTGATCTAAATTAAGTTATGAGA AACATGCGCCACGTGTGGGAAACATGCATTTTGCACTTCTATTTTATGAGAAAATCTTGGTGAGTGTGTTATGCTCTATGACTCTATGCAATGGTATGTT TGCGGCTTAAAACAAATGTCAAAAACTTCTGTGACAAGTTGTGCGTATAGCATAGCTTTGGTTCTCCATCTGCCGCTCAACCTAGTGTAGGATGTGATTT GCTATTGCAGGATGACAATTCTGTAGTTTTCCCCCTTATTATGGAAAAAATCAAAGATGTGGTACAGTCTTTACTGTTCTTGTTTATTTATTTCTCAAAT TCTGCAGTTTTTTCATGTTAAAACTCCTGCCTCAAAGTTGCCGATTACTATAAATTTAGGGAGGGGATCAAGTTACTCCAAGAGTAAGTTTAAGAGACTT ACTCCTCATCTTATA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_44798; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_1646
| Blastp | Protein argonaute 4 from Arabidopsis with 70.58% of identity |
|---|---|
| Blastx | Protein argonaute 4 from Arabidopsis with 70.58% of identity |
| Eggnog | eukaryotic translation initiation factor 2c(ENOG410XP07) |
| Kegg | Link to kegg annotations (AT2G27040) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440717.1) |
| Pfam | N-terminal domain of argonaute (PF16486.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |