| Id Trinity | FTRINITY_DN54702_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_159112 |
| Sequence | GAAGAATATCTCTGCACAGGGGAGTCATAGAGATTGGGACGTGCGAGATACGGCGCGAGGAGGGTAGTACACCGATCATTTTTTCTGAATAGGATATTTT TGAATTTAGGGCTGGAGCAACCATAATTATGGCGGACTTAGAAAACTTGCTTTTGGAGGCAGCTGGGAGAAACCGACACTCTCTTCAGCCTTCGAGAAGA GGACACTATGCATATTCAGATGGTGGGAATGATTCTGGGGAGGATTCTTCAGATGATGATCTTAATTATAATGACAGAAAGCCCCCTGGATCACATGTTC CTTTTAAGAAGAGAATAGATCCACCAGAAAGAGATGATGACGAGGGAAGTCAGGAAGAAGGGAATGATGCTGTTGACCATGATGATGGTGAAAGCAGTGA TGAATCTAATCTTGGCGGTGATCTTTATAAGAATGATGTCGACAGGCGAAAGCTTTCTGAGATGACTGAACTTGAAAGAGAGATGATATTGTCAGATAGG GCTACCAAGAAGGGTGATAAAACTTTATTGGGGAAGATAGTGTTGAAGCGTGATAAGGGAAAGACATCTGTACCCAGAGAACAGACTCCACCACTCTCAT CATCTCGTGTTCGTTCATCAGCCAGATCTGCTGACAGGTCAACTGCCAAGGATGATGCATTGAATGAATTGCGTGCAAAGCGGATGAAACAGCAAGATTC AGAAGCACACCACAGGTTGATAGATGCACCTAGAAGTTCAGGCTCTGGTCCTTTTTCATCAAAGCACAAACCCTTTACTTCAAAGAGTCTTGGTAGCTCA AGTGAGGGCGAGTCCCACAGTGACGATGAAGTGCCAAATGGATATCGAGGAATCATTGACAGCGATGATATCAGGACAATATCTGGATTTGAGGTTCCTA CTTTTGAGGATATAAAAGAAATCACCATTTGCAGATCAAAACTTGCAAAATGGTTAATGGAGCCTTTTTTTGAGGAGTTAATTGTTGGTTGCTTTGTTAG AGTTGGTATTGGTAGATCACAGTCTGGGCCCATGTACAGGCTCTGCATGGTGAAAAATGTTGATGCGACAGATCCAGATCGGCAGTATATATTCGAGAAT AAAACTACACACAAGTATTTGAATCTTGTATGGGGAAAGGAAACTTCTGCTGCGAGGTGGCAGATGACCATGGTTAGCGACTCTGCTCCACTTCAGGGGG AGTTTAAACAGTGGGTTAAGGAAGTAGAGCGAGGTGGTGGCCGGATGCCATTCAAAAAAGATGTGTTAGAGAAAAAACAAGCTATACAAAAGATCATCAC TTATGTTTACTCAGCAGCTACTGTGAAGCAAATGTTACAAGAGAAAAAGTCGGCGTCAGCCAGGCCAATAAATATTGCGGCTGAGAAGGATCGGCTGAGG AAGGAGTTAGTAAAAGCACAAAGTATTCAAAATGAAGCTGAAGTGGAGAGGATCAAGACAAGACTGCAGGAATTGGAGGCATCCCGGCAAGCTCAGGAGA AGGACTCCAAAGCTTTGAGGCTTGCTGAGATGAACAGAAAGAACAGATTTGAGAACTTCAAGAACGCTTCTCAATTAAAACCACAAACTGCTGTTTTGAA AGCAGGGGAAGCAGGTTATGATCCATTTTCAAGGAGATGGACTAGATCAAGGAACTACTATGCTGCCGAACCCAGTGAAGAGGCTGCAGCTGCAAAGAAT AGTGCCAGTAGCACAGTGGCTGATTCAAGCAGCAATGGGACGGGAGCAGTGAAGGCTGGCGAGGTTGCTACTGCTGAGGCCTTGGAAGCTGCTGCCGGTG CTGGTAAGTTAGTAGACACAAGCGCTCCGGTCGATCAAGGAACCGAGTCATATCTTATGCACAACTTTGATCTGCCAATTTCCTTGTCTGCACTCCAAAA TTTTGGGGGAGCCCAAGGAGTTCAGGCAGGATTTTTGGCTAATAAACAAAGAATAGAAGCAACTATGGGTGTCCGAGTTCCAGAAAATGATGGCAAGAAG CATGCTCTGACATTGTCAATTAGTGATTACAAGAGAAGAAGAGGACTCCTTTGAAGTTTGTTGCTACCCTCGAATCATGCCGGTTGAAGTACTGAATTTA TCAGGTCGACTCTTTTATTAGGTGAAGTTGGTTTATATCATGTAGAGTACTGTTATGCCCCTAAATTACTGAGTATCTCTAAAATACTTTCAAATGGTCA TGTTTACATTTTCTTTTCTCAAAATATGGAAAAACTGATGAATATAAGTTAGCTATGTTTATGTGTACATTGGTTTTAATTGGATGCTTGGAAAAGTGGA TAGTACAAAGTTCGGTCTGGTACCAAAACATTATTGAAAATAAACTATTTTGTTGCAGAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_45003; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_159112
| Blastp | Protein RTF1 homolog from Arabidopsis with 60.95% of identity |
|---|---|
| Blastx | Protein RTF1 homolog from Arabidopsis with 60.37% of identity |
| Eggnog | Rtf1, Paf1 RNA polymerase II complex component, homolog (S. cerevisiae)(COG5296) |
| Kegg | Link to kegg annotations (AT1G61040) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424592.1) |
| Pfam | Plus-3 domain (PF03126.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |