Id Trinity | FTRINITY_DN54715_c3_g1_i3 |
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Name Transcript | Ll_transcript_158381 |
Sequence | TTGGTGCTTGGTGCAGCCTCAAGGCATGGCTTTATTAGATTCAAGTCATCAAGTAAACCAAGCAGCATAGCAAAAGGGGCACCAGATTTTTGTACAGTGT ATATAATATCAAAGGGGAAGATATCTTCAGTCCGAAGTGCTTCTCGAGCAGCACCACATGCCTCCCCACTGCTCAAACATATACAGAATCTAAATAATGA GAGTAATAATCCTAAGATAACCTCATCTAGACGTATGTCTGTGGGATTCAGAGATCATCATAGGACTTCCTTCAAGCCTAACAGTTTGCAGCATGAATCC ATTAAGTTTGGAAAAAGACTAGGGTTGAGTGGAAGGTCATGCATGGATTTGTCAGAATCTGAGACAGATATATCATTTGTAAGCTCTGGCAGGCCTAGCA CTAGCAGTGGACGTTCATCATCTGTTTACTCTAACTACATTGATTCAGGCCGTAACTCACGAATTTCAACCAGTTCAGATCATAGCTTGGGTACCGGGTT CATCTTCAATGACCATACTTCACCAGATCTTTCATTTTCTAAGGAAAGCAATAGAATATCATCTTCATATTCAAATAAGAACATGGATGAAGAAGTTGGT AGGAGGAGATCTGGGCTTGAGTTAAAGCAAATGATTGAAATGTATGGTGCCGCACGCAAAGAAGCACTAACAGCCGGACAAAAGTTAATGAGACGTAACC ACCAGAGAATCGAGCCAGAAAAAAAAATAGATGAGGCACGATTGTCCCAGGAAGCATCACTTGCAACCATAGAGAAAGAGAAAGCAATAAGTAAAGCAGG GTTGGAAAAAACTGATGCAGACACGAAAGTTGCAGAAATGGAATCAAATAGAAGCACAAGTGTTGAAATGAAAGCTGTTAAAGAAGCTGAGGAAATGAGG AAACTATTGAGTAATGATGAAAGATATAAGAGATACACAATTGAGGAGATTGAAATAGCCACAGACTTCTTTTCTGAATCTCGAAAAATAGGGGAAGGGG GCTATGGCCCAGTCTATAAATGTTACCTTGATCACATTCCAGCAGCTGTAAAGGTTCTTCGTCCAGATTCTGCTCAAGGGAAGTCACAGTTTCAGAAAGA GGTTGACATACTGAGCTGCATGCGGCATCCGAACATGGTGCTTCTTCTAGGAGCCTGTCCAGATCACAACATACTAATTTATGAGTATATGGCAAATGGA AGTTTAGAAGATTGTATGTTTCAAAAGAAGGAGGAGCATCTGATGTCTTGGCAGCTCAGGTTTCATATTGCTGCAGAGATAGCCACTGGATTACTCTTCC TACATGAAACAAAGCCTGAACCATTAGTGCATCGTGATCTGAAACCAAGCAATATACTACTAGACCACAATTATGTAAGTAAGATTAGTGATGTTGGATT GGCAAGGATTCTCCCTGTTGTAGCTGAAAATGTAACACAATGTCGCATGACTTCAGCAGCTGGAACTTTCTGTTATATTGATCCAGAGTACCAGCAAACA GGAACGATTGGTGTTAAATCTGATGTATATTCTCTAGGGGTCATACTTCTTCAATTATTGACAGGGAAGTCACCAATGGGTTTGGCTTACCAAGTTGAGG AGTCTATTGAGAATGACACATTTGTTGAAATGCTTGACAAATCTGTTCATGAGTGGCCTCTTGAAGAAACATTATGTCTTGCAAAGATGGCAGTCAAATG TGTAGAACTCAGACGAAAAGATAGACCAGACCTCGGTAAAGAAGTGTTGCCGGAGCTCCAAAGACTGAGAGAGTTTGCTGAAGATATCATGAGTCCAACT ACAACATTTTTTGGTGAAGAAGATAGCAGTAGTGAATCTTCTCCTAATCCAAGTCTAACTTCTATTCAACAGGATGTGATGTTAGACCATTCAGAAAGCT CAATAAGTCCTTCAGCCCCATCACCACCACCAACACGAGGGGCCAACTCTCAATAACCCCGCTTGCACTGGATTTAGTTGTCCTTCACCGTAATGTAGTT AAGACAAGGAATGTGATATAATTAGTATATACATATTTCCAGACTCCAGTTTCTTCTGTTCTTTGAATCCGTTTTTTCTTTAATTCTTTCTAAACTCATT ATGCACATATAAAAATTCTACTCTATACAAATTGTGATTTGATTTTCTAATAAATTAAGGTAAATCAATT BLAST |
Tissue | flowers |
Gene name | LI_gene_45095; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_158381
Blastp | U-box domain-containing protein 35 from Arabidopsis with 39.24% of identity |
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Blastx | U-box domain-containing protein 35 from Arabidopsis with 38.41% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT4G25160) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456653.1) |
Pfam | Protein kinase domain (PF00069.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |