| Id Trinity | FTRINITY_DN54721_c1_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_159413 |
| Sequence | TCTCAATTACAAACACTCTCCAAGATATTGTTCTTTTATAACTATGTTTACACCAATTCGAACTCAATATGTTATATAGGTTCAGTTATTGTGGTTTTTG TTTGGCTTATTTGTTACATATTTCTAAACTTTTTGAATTCTCAATTTATCCTTACAATTATTTAACTATCTCCATAAACTTAAACTTGAGACCTCTTAAT TAACTATTAAGTATGAGAAAACCATGCCAATTAATTTAGGTGCTTAAAGTAGATGTCAGTTAAATATAGTAAAGAAGTCTTATAATAGTGGGTAAAAAAA ATTTGAATTCAGTTGGTGGTGGTTTAGTTTAATATGGGGGTAGACACGTATTGTGGATTAGTTCTGATTTGTTTTAGGAGTTTTTTATTGGGCGTATCCC TTGTTTTTCTTATCATAAATTGTCTGGATGATATTTCTTGTAGTTACGTATCCCACATGAGAGTGTTCTCAAGTTCTTTATCTATTCAATAATTTCCTAT GTACTTTTAAAAGAAGTAGTATAAAAAATTAGTACTTGGCTGGGAGGGTCCTTATGTTAGAATGTCTTCATAGCATTATAAGAGGCTAAACTGTGTATTC CATCCGAAATGATGGACAAAGGCAATACAAATTTAAAGAAGAGCACAAATGTCTTTTATAATTTTATCCTCTAATATACTCGACATGTCCTGCATTAAAG TATGACATAGTGCTAAAAGGTTCCATCACCTACTGAATATGTGGAGGGTTAGATTTACACAATCTTATTCCTATAAAAGAGATTGTTTTTAGGATTTGAG CAGGAAGCAACCTCGTTGTCTTGTCATAGATTATAGTATAAAAAATGGCAGCAGCTTAGAGAAATGCAGACATTAACAATTCAATAACAAAAATAAAAAG ATAACCAAGGTCAACATATCTTTTGATGTTGTGATACTCTAGAAATATCTTATATATGTTTTCACCATACCTTTTCCCATACAGCTATCATCAATGGTAC TCTAGAAATATGCTTAAACAAATTAAAAACCTGATGATTCTTTTATATGACCAGCATGAAATCAGTGGTTGAGAGATATAACACATGCAAGGAGGAAAAT CAACAACTGATAAATCCAGAATCAGAAGTCAAGGTATGCTCTATGTTAACCACTCTTCTCTAATGTCTCATATTTCTGCCATAAATAGCAGCTACAAGTA TAGAGTAGTTGAGCTCCATCTATGTTTTTTAGTTTATTCATGAATTTATTGAAGAGTACCATTAAATGTGCATAATATGCTCAATATATAAGATATTTAG GACCTTATATCAAAACTGCACATAATTTGTTATTCTTATACATAATAAAAGCACAATCACTCCTTCTCCCCTAAATTAGCTAGTCATAATTTATGATTTA GAGAGAGAACAAAATATAGCTTTGGCTAATATGTTAACTGCCAGTAACTCTAGGAACAGTACTGTACTTATTTGATCTCACATGATTGTTAAAAATTTCA GGCATCATGTGTATCAAATTCAATTGAAGCCCAAGCACTACCAAGAATAACCATATTCTAACTTCATAATCAATCAGTACATCCTCCTTTTGATAAACAT AAAGAGAATAAGAATGCACAAATAGATTACATAAAAAACCTAAAAATCTAATGACTATAGCAATCTTCAGAAGTGATGATAATTAACAGGCATGTATACA ATCCCAAAAAACAAATGCAAAAGTTATGATCGAATACTAAACAAATTGTTCAAGCTCCTTGTATATATGATCACATAACTAGGAAGCTATGGATAATTTG GATCACATTTTGCATTTTGGCATCACACAAAATGCAAAATGTGAGATTAATCTGTATTCTAATGTCAGACCCAAAATTACTGGTACTTCTCGTGAAGTAA CTAGACATTGTAGAAGTAATAAACCAGTATAACCTCGTATAACTATTGTCTTCATAAAATCACAAAAATCCCATTATGAAACTGGGGCTCAAATGCATTC TTGTCCTTCAAAATTATCAAAAAAATTAATTGTTTTATTTCAATAGTGCTATTGATTCTTAAAAATTCAGAATTGCAAAAGATGAAAAGAATAGCAAAAG ATGAAAAGAATGCAACACAATTGCTTTTGCTAGACAAATGAACAAATGAAAGTCAGGATCAAGTATGACTCCTAAGGTCGAATTTCAATCATAGATATAA ATCACATGTATTCTATTTTGTCAAAACTTATATTCTAGAATCCTAATCAACCAAATCAAACGAACTATCTTTTAATAGAGTTATCTTTTAATAGAGTTAC TACTTATGACTTGCCATATGAGCATAACTCCATTAGAAAATAGTTTGTTTGTTTTGATCGAACAATATTACTAGAATATATTCAAACCATACAGCCAAAG TGCCAAACAGTGGTGCATTCTTTATACTATCAATGAGCAGAGATGGCTGATTTAGTACATCATGAGAACTTGGACTCTAAAATAAGCTGATAAATATTTA TGTTGATCAGTTCAGTCCAACATTGATTTTCGTTCAAGTTACTTTTTTAGTCATAATACTTGTAAATGGAGAAGAAAAATGAGAGATAAGAGAAACTGTT TTCTGTATATTTATATAATGATTTCATTACATGATCGCAAAGGGGAGTGGAGGATATATAGTACAAGTGTATAGCTGTAAATAGATGACAGCTGACACAT ATAGTATAACTACCTCTGTCTATACTTAACTAACTCTTTCACAGTCCTCCTGAACTTTTACATTTCTTCAGAACATTAGGAGCTTGGTTGACAGAAAGTT TTGCCTTAAATTCTATTTCCGACAAAATAGAGATCAAGTTTTATATGTTTAGTTTTGTTATGAAGAACTAGAATATGCGTCACTCCAACAGTTTTAATAT TATCACATAGAATAAGAGGAGTTTTGTAGGGAAATTTAAGTTCACTGGGTAGTTCAACCTATTATAATTCGTGACAAGTTAGGAGGGCCAAACTTCTGTA TTCTGCTTAGTACTAGACTTGGAAATTGTACTTTGATTCTTAGACCACTAAGTAATAAGATCAGGCCAGACAAATAGACAAGCTCATGAGATAAACTTTC TGTCATCTAAATCTCAGCCCAATCAGTATCACAAAATTCTTTGAGTGGTAGAGACAGGCTTAAGAAGGCCATAAGCAGCAGCTCCCTATAGGAATATGAA GATTCTTTTAAACCCTAAACTATGAATTTAAACCATATATGTTCGCTCAAGGGAGAAAAGGTTTAGAATGTAACCCCTTATTTGGGAGTCAGCATTCTAA CTTCTGAAACAAGTGGGGGAAAGAGGAAGTGAATATCACTAAAACAACATATAGGGAATTAAACAATGAACATATAGTGCTGGTGGAGAATAAGACTTCA AGTAAAAGTTTATCTTGGAGTTATGGTTTTCTGTAACTAGGATTGTTTATTTAGAGGACTTTAATAATGTAAAGTTATGCATTTAGTGTTTTGCCCGGAC TAGATGTTACTATCCCAATTTACTCTTTTTATGGGAAAAACTTTCTTTTTTGGGGATTTGAAGGGACTAAAAATGTCCCTCTTGTCACACTTTAATAGTT TTTATTGATATTTAATTAGTAAGGTTTTGTGAGTGTTATGTACAAGTTTCTATAGTGGTTCTATATTAGATGCCAAATGGAAAAGGCATATTGGCTTTAT ATATAGAAAAAACTTACACATGCTTATCATGGATCTGAGTATCAGTTTGTAAATTTACATCACAATCATGTAAGATTTCATTGTGTCATGTTGAAGCAAT TCTGCTAGGATCTAACTCAAAATGAAAAAAAAAATCATCTTTTTTCATTCCCCACTTTCAAATTAACATTTACATCATTTTGCTTGATAATTGATAGTTT TGGCAAAAGGAGGCAGGCATTTTAAGGCAGCAACTACAGAATCTACAAGAAAACCATCGGTACAAGTGCAACCTTTCTGTTAATTTATTTAGCAAAACAT TTTTCAATTCTACTAAGGAAATTAAACAGGTACAGTTATGGAAAAACTTCAATGCAGATCAAAAGGCAAATGATGGGAGATCAGCTCTCAGGTTTGAGTG TCAGAAACCTACAAGATTTAGAGAATCAACTGGAAGTGAGTCTCCAAGGTGTCCGGATGAAAAAGGAACAAATTCTAACAGATGAAATCCGAGAGCTGAA CCAAAAGGGCAACCTTATCCATCAGGAAAATGTCGAGCTTTATAAGAAAGCAAACCTCATTCAACAAGAAAACACGCAATTATGCAAAAAGGTCTATGGC ACAACCGATGTGGCTGTGAGAAGAAATGTATTTGTTCCAATTCCATTCGATGTTGATGCAGGGAGGGATCAACAAGCATTGATCCAACTTCAATTAAGCC AACCAGATCAAGAAACATGTGAGACATCAGGCAGTGGCAGTTCCACAAAATGAAGGTCTTCTTTGGTATGATATTTAGTACTAATCTGTTTAAGAATTAT CAGCTTAAGAATCACATGTGGAGAAGTGAAGAGTATTTATCAATGAATGTTGCTCACTTCACTCAAAATAAGAATCCCAGCAGAGAAGAATATGCTTCCA GAAATCAGATTGTTTATATAAATGCTAATCAGTACAATTATGTTTGCACAATGTAATATGGATGTGACTGCATGAGATCTGGAATACTATAGCATGGACA TAAAAGTTTCTTTCTGTAAGTGTAACCATCATTTCCATGGAGATAACAAACTAAGAATTCTATGAGAAATCCACCATGAATTCTACTAGAGTTTAGATTC TTTGTCATTCTGCATAGATCTCAGCAAAAGGATAAACTTTTTGATTGCTCTCTTCCTCCCCCTCCCACTAAATAAGAACAGAGAGATTAGTACTTTTTTT TTGGTACAAAGAGAGATCAGTACTTGCTTATTTAGCTAGTTTATCTTCTTTTTCTCAAAAAGAAGAAAAAGGGTCTCTGAAGTTAATATAGAATTTATTG TGTCATCTCTTAAACTCCTATTTTGGATGCATGCCTTTTGAGAACCAAACCTACTAGGTAGTAAAAACAACAAAGCCTTGGCACAATGTAACTAGCATCT TAAAAACTAAATTAGTTGCTTAGTGATCATAAGATCACTTGTTTAAATTCTAGGAACAACTTCTCCGTTTGCGGGGTAAGTTTATGTACATCTACTTTCC CTTACCCTACTAAGTAAGAGACTCGTACCCTGGGTGACATTTTTTTATCTTAAAAACTATAAGAGAATCCTATAACAGCTTACATACAAATGGTGCTGCT ACTGAAATGCAATCCTTTGTTGGCTGTGAATTTGACAAAGGAAATGAGCAACATCTGCATGAGTCGAAAAAGAGAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_45154; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_159413
| Blastp | Agamous-like MADS-box protein AGL17 from Arabidopsis with 49.6% of identity |
|---|---|
| Blastx | MADS-box transcription factor 27 from Oryza sativa with 51.26% of identity |
| Eggnog | Transcription factor(COG5068) |
| Kegg | Link to kegg annotations (AT2G22630) |
| CantataDB | Link to cantataDB annotations (CNT0002701) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422741.1) |
| Pfam | K-box region (PF01486.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |