| Id Trinity | FTRINITY_DN54723_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_160166 |
| Sequence | TACCAAAAACATCATCGTTTTTTGTTCAGGTAATAAGATCTCATAAACTGATCTATTTGTCCCACAAAATTTTCTTACCTTAATCATTCTTCACTGTTCT CTTCTAAACAAATTCGTAAAGGGTTTCCGTAACGTATCATGGGTGATAGTCAGTACTCGTTTTCTCTCACCACATTTAGCCCTTCTGGAAAGCTAGTTCA GATTGAACATGCTTTGACAGCTGTTGGGTCTGGACAAACATCTCTGGGAATTAAAGCTGCAAATGGAGTTGTTATTGCAACAGAGAAGAAACTGCCATCT ATATTGGTTGATGAAGCATCAGTCCAAAAAATTCAGTTATTGACACCAAATATAGGTGTTGTTTATAGGTTTGTCTCTTTCTACATGTTTGAATCATTTG AGTTAATTATATATTTATATCATTAATTCCTTGTAGTTTGACGGTCCCTTCATATTATGGAATTTGGCGGTTTAGTTAGAATGCATTCTTAAACATGAGA GGCCTCTTAAGTTTCCTAGACACATAAAGATCTGAGACGGGAGGCAAGGCAGCTTCCTGAGGGAAGTGAGACACCAATTTTGAGGGAAAAGTTCTTTGTT GGACATAGAATAGAACTAGAAGTTCATGCTTGAAATTGATTAAATATTACATAGAAGATATTTTTTCAATCAAAATATTTTTCAATGTTTTGTACTTTTG TCACCGGCAAACTATTGCTTATGTGCTGTTGTAAATGTGAAGAAGTCTACCTAAATCAAACAATCATGTGGCAAACTAATGGTGTTTGTTGAGATATTAG CATATCATGGATAGGATTTCAATGAATTTTTTGAATGAGATTTACTGGATTCAACCTACAAACTAGAGGTTTGATGATGATTTTTTTCCTCGGGGAGGGG TGGGGTGGATAGGATTTCAATGGATTCTTATAAAGAGATTTACTGGATTCGTGCCACGACTTACAGGTTTGGCTAGGACATTTCTTTGGGAGGGCCGGGG AGTATGTGAGTTGTGAAATGGATGACTGCTTCTCTGGAAACACTTTGTTGTGAAATGAATACGGATGATGTTTAAAACTATATTCAAGCATTTAAAAAAT GTCAATATATTAAACAACATAAATCACTTCCTTTCTGCTCTCTTTTTAATCTTTGAATGAGATAGACTGTCAAACTAAATTGTTTCCTTAGGTTTGTAAG TTTGTTTTTGTTTGAAACTTCATAAAACAGGGTGAGCCAGACTATCTTTCTCATTGCATTTGAGCTTTTTGTACATGGATGTGGTTATGCCTCCTAACTA GTATGCAAGTATCTTCTTGCCTTAACCTAAATTTTGTCTTTGTTGTTTAGTGGCATGGGTCCCGATTTCCGAGTTTTGGTTCGAAAAAGCAGGAAACAAG CTGTGCAGTATCAACAACTATATCAAGAACCAATCCCTGTTACTCAACTTGTAAGGGAAGTTGCTGCTGTTATGCAGGAATTTACTCAGTCTGGTGGTGT TAGGCCTTTCGGAGTGTCCCTGCTGGTTGCTGGATTTGATGACAAGGGACCACAATTATATCAGGTGGATCCATCAGGTTCATACTTCTCTTGGAAGGCT TCAGCCATGGGGAAAAATGTTTCTAATGCGAAGACATTTCTTGAGAAGAGGTATACCGATGATATGGAGCTTGATGATGCAGTCCACACAGCAATATTGA CCCTGAAGGAAGGCTTTGAGGGACAAATCTCTGGAAAAAACATTGAAATTGGCATAATTGGTGCTGACAAGAAGTTCAGGGTATTGACACCAGCTGAAAT TGATGATTATTTGGGTGAAGTAGAGTAATGTGCAATGAAGAAATCCTCTATGTTCTTGAAGTTAGTGTTTGTTTGACAGTTAAGTTCAATTGAATTTGGA GATTGTAGCTTAAATGATGATAAGGACTTACTTGCCAATGGCAGTGGTGAATTTGTGAGATTCTCTTGTACTGGCCATCAAAGGGATAAAACTTTTTTTC CAAAGTGATTATTAGTTTACTTAACAGACCTCTTATGAATTTTCTACTTATTTTCTTTCTTCCTCTTATGATCTATTTGCTCCTTATCTGTCTATTGCTA ATACTTACTTGCATGTTAAGTTTAATGCATTATGCTGGCTTTGGGATCAAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_45170; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_160166
| Blastp | Proteasome subunit alpha type-2-A from Arabidopsis with 91.08% of identity |
|---|---|
| Blastx | Proteasome subunit alpha type-2-A from Arabidopsis with 90.62% of identity |
| Eggnog | The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410XPQ8) |
| Kegg | Link to kegg annotations (AT1G16470) |
| CantataDB | Link to cantataDB annotations (CNT0001192) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443721.1) |
| Pfam | Proteasome subunit (PF00227.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |