| Id Trinity | FTRINITY_DN54723_c0_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_160168 |
| Sequence | AAGTAGAAAAAGAATTTCATCAAACACCAAAAAAATTCAGTGTCTTAGTTCAGGTTTCTCTACCAAAAACATCATCGTTTTTTTTTTTTTTTTCCGTAAC GTATCATGGGTGATAGTCAGTACTCGTTTTCTCTCACCACATTTAGCCCTTCTGGAAAGCTAGTTCAGATTGAACATGCTTTGACAGCTGTTGGGTCTGG ACAAACATCTCTGGGAATTAAAGCTGCAAATGGAGTTGTTATTGCAACAGAGAAGAAACTGCCATCTATATTGGTTGATGAAGCATCAGTCCAAAAAATT CAGTTGTTAACACCAAATATAGGTGTTGTTTACAGTGGCATGGGTCCCGATTTCAGAGTTTTGGTTCGAAAAAGCAGGAAACAGGCTGTGCAGTATCAGC AACTATATCAAGTACAGTATCTCTTCATTTTCCATTCCTGTATATTTTTCATACTCGAGTTCTGTATATACTTGGTAAATAGGATTCAGTTATAATGTTG TCAGCATCACTTTGATATTTTGAAATTGGAATTTTATTGATTTCCATGGTTTCAATTTTGTCATTAAGTAACACGTCTAAACGTAGTGTTCATTATATCT CATGCAAAGCATATCCATAGTATCATAAATTGCTATTCTGGCCTTCTGGGTGTTACCCATCTGCCTGGAGATTACTGGAGAATTTACCCATTCCCAAATA TGACAAATACTCCATGCTCAAGTCCGCTATATTCTACCAACTGTCAGTATCAACAGTTCTAGATTTAATATCTTTGATAAGTACCTGCCGTTGAAGTGCT ATTATGTTGACAAGGATCAATTAATGGGTTTCAACTTCCAACTCTGTCTTTTTTCATCTGAATACCTGGGTACTTCAAAGAAGGAGAACCCTGTACCCGG TACGTACAATGTACCCGTGTTGGTGTAACACAGATTACAACTCAGCCAATGTATTATTTTTATTTATAATTTATGAGATAAAATAGTCAAAATTTATGTC GTATGTTTTCCAGTGCTCTGAGTCACATTTACCATTTTCATTATACGACCTTGCTTTTATTGTTGTATCATGAATTTCTTATGAATGTTGGTTGTTGCTT ATGGATTGGATGTTCCTTTCAAGTTATTTTCTTTACCTGGAGTCTTACGTTCTTTCTGATCGGTTTGTCATTATTAAAAAATAAAATAATTATTATGTAA TATTGATAATCTTTATAAATAAACATCTGCCCTTATTTTTCTCTCCTTTCTGTTTTCTTTTTGGTATTCTAGCATGATTATTTTTTGTTAAATATAGGTT TCATCTGATATTTTAAAATGTAAGTGCAGGAACCAATCCCTGTCACTCAACTTGTAAGGGAAGTTGCCGCTGTTATGCAGGAATTTACTCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_45170; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_160168
| Blastp | Proteasome subunit alpha type-2-A from Arabidopsis with 94.12% of identity |
|---|---|
| Blastx | Proteasome subunit alpha type-2-A from Arabidopsis with 97.87% of identity |
| Eggnog | The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410XPQ8) |
| Kegg | Link to kegg annotations (AT1G16470) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_006584582.1) |
| Pfam | Proteasome subunit A N-terminal signature (PF10584.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |